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Cheap flights from Malaysia to Tokyo from RM 539

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 3/3. Fares are subject to change and may not be available on all flights or dates of travel.
KUL — TYO
18 Feb — 25 Feb1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Malaysia to Tokyo

Enter your travel dates to find the best prices.

Cheapest flights from Malaysia to Tokyo
Explore the most affordable flight options available from Malaysia to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 19 January 2026.

Wed 4/310:35
PEN
-
HND
1 stop13h 25m
Multiple Airlines
Wed 11/310:45
HND
-
PEN
1 stop32h 15m
Multiple Airlines
Deal found 17/1RM 1,269
Sun 10/507:00
JHB
-
HND
2 stops16h 45m
Multiple Airlines
Fri 15/502:05
HND
-
JHB
2 stops33h 30m
Multiple Airlines
Deal found 17/1RM 1,281
Sun 10/514:10
KUL
-
HND
Nonstop7h 25m
Multiple Airlines
Thu 21/514:00
HND
-
KUL
1 stop34h 00m
Multiple Airlines
Deal found 17/1RM 1,294
Mon 19/112:30
KUL
-
NRT
1 stop25h 55m
Multiple Airlines
Mon 26/110:25
NRT
-
KUL
Nonstop7h 30m
Multiple Airlines
Deal found 16/1RM 1,294
Wed 4/311:10
KUL
-
HND
1 stop12h 50m
Multiple Airlines
Wed 11/308:40
HND
-
KUL
3 stops18h 50m
Multiple Airlines
Deal found 18/1RM 1,298
Mon 7/1212:20
KUL
-
NRT
1 stop31h 00m
Philippine Airlines
Sun 13/1214:25
NRT
-
KUL
1 stop11h 50m
Philippine Airlines
Deal found 16/1RM 1,298
Sat 13/606:35
PEN
-
NRT
2 stops31h 55m
Multiple Airlines
Sat 20/608:15
NRT
-
PEN
1 stop14h 05m
Multiple Airlines
Deal found 18/1RM 1,298
Fri 20/211:45
KUL
-
HND
1 stop11h 35m
Philippine Airlines
Wed 25/201:45
HND
-
KUL
1 stop10h 00m
Philippine Airlines
Deal found 16/1RM 1,302
Thu 22/100:10
KUL
-
NRT
Nonstop7h 15m
Batik Air
Tue 27/121:50
NRT
-
KUL
Nonstop8h 05m
Batik Air
Deal found 18/1RM 1,302
Mon 2/214:50
KUL
-
HND
Nonstop6h 50m
AirAsia X
Thu 18/623:50
HND
-
KUL
Nonstop7h 20m
AirAsia X
Deal found 18/1RM 1,306
Mon 19/119:30
KUL
-
NRT
1 stop14h 15m
Multiple Airlines
Tue 20/121:50
NRT
-
KUL
Nonstop8h 05m
Multiple Airlines
Deal found 18/1RM 1,306
Mon 21/911:05
PEN
-
HND
1 stop12h 55m
Multiple Airlines
Sat 26/923:50
HND
-
PEN
1 stop12h 45m
Multiple Airlines
Deal found 17/1RM 1,310

Find flight deals from Malaysia to Tokyo

Keep the following information in mind while searching for Malaysia to Tokyo flight deals. Data was last updated 19 January 2026.

Round-trip from

RM 1,269

One-way from

RM 539

Popular in

December

Cheapest in

June

Average price

RM 1,634

Good round-trip deal

RM 1,456 or less

Good one-way deal

RM 663 or less
China Southern
  • China Southern
  • 4/3-11/3
  • 2 total stops
  • 45h 40m total
  • Malaysia to Tokyo
Search Deals
AirAsia
  • AirAsia
  • 3/3
  • 1 total stop
  • 13h 30m total
  • Malaysia to Tokyo
Search Deals
Highest demand for flights based on searches. 7% potential increase in price (RM 551 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 2% potential price decrease (RM 146 potential savings vs. average return price).
Search Deals
Average for round-trip flights in January 2026
Search Deals
Price to beat on a round-trip flight from Malaysia to Tokyo (TYO).
Search Deals
Price to beat on a one-way flight from Malaysia to Tokyo (TYO).
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Malaysia to Tokyo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 19 January 2026.
Use the filters below to find and compare flights from Malaysia to Tokyo that are best for you.

Fly from

Malaysia

Fly to

Tokyo

Route

Departure

Return

Price

PenangTokyo

PEN - HND

PENHND

Penang Intl

Wed 4/3

10:35-01:00

1 stop13h 25m

Tokyo Haneda

Wed 11/3

10:45-18:00

1 stop32h 15m

RM 1,273

Johor BahruTokyo

JHB - HND

JHBHND

Johor Bahru Sultan Ismail Intl

Sun 10/5

07:00-00:45

2 stops16h 45m

Tokyo Haneda

Fri 15/5

02:05-10:35

2 stops33h 30m

RM 1,281

PenangTokyo

PEN - NRT

PENNRT

Penang Intl

Tue 26/5

06:45-15:30

2 stops31h 45m

Tokyo Narita

Thu 4/6

08:15-08:30

1 stop25h 15m

RM 1,318

Kuala LumpurTokyo

KUL - HND

KULHND

Kuala Lumpur Intl

Mon 8/6

20:00-15:05

1 stop18h 05m

Tokyo Haneda

Wed 10/6

16:35-19:00

1 stop27h 25m

RM 1,322

Kuala LumpurTokyo

KUL - HND

KULHND

Kuala Lumpur Intl

Wed 3/6

20:00-15:05

1 stop18h 05m

Tokyo Haneda

Sun 14/6

16:35-19:00

1 stop27h 25m

RM 1,322

Kuala LumpurTokyo

KUL - HND

KULHND

Kuala Lumpur Intl

Thu 4/6

20:00-15:05

1 stop18h 05m

Tokyo Haneda

Thu 11/6

16:35-19:00

1 stop27h 25m

RM 1,322

Kuala LumpurTokyo

KUL - NRT

KULNRT

Kuala Lumpur Intl

Thu 16/7

20:00-07:35

1 stop10h 35m

Tokyo Narita

Sun 19/7

09:30-19:00

1 stop10h 30m

RM 1,322

Kuala LumpurTokyo

KUL - NRT

KULNRT

Kuala Lumpur Intl

Sat 11/7

19:25-08:00

1 stop11h 35m

Tokyo Narita

Thu 30/7

09:30-18:25

1 stop9h 55m

RM 1,322

PenangTokyo

PEN - NRT

PENNRT

Penang Intl

Wed 4/3

19:40-13:45

1 stop17h 05m

Tokyo Narita

Wed 11/3

19:00-12:00

1 stop18h 00m

RM 1,330

Kuala LumpurTokyo

KUL - NRT

KULNRT

Kuala Lumpur Intl

Fri 8/5

02:15-20:20

1 stop17h 05m

Tokyo Narita

Sun 7/6

09:15-01:15

1 stop17h 00m

RM 1,358

Flights are sorted by cheapest return flights first.

Deals found on 17/1

Showing 1-10 of 60 results
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Best time to book a flight from Malaysia to Tokyo

Have a flexible travel schedule? Discover the best time to fly to Tokyo from Malaysia with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Malaysia to Tokyo

What is the cheapest month to book a flight from Malaysia to Tokyo?

Currently, February is the cheapest month in which you can book a flight from Malaysia to Tokyo (average of RM 300). Flying from Malaysia to Tokyo in December is currently the most expensive (average of RM 1,310). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MY to TYO?

Find hourly flight availability from Malaysia to Tokyo. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated 19 January 2026.

It’s typically best to fly out from Malaysia to Tokyo at midday. Doing so could potentially save you 53% on the flight price compared to flying in the evening, which is usually more expensive.

Weekly flight availability from Malaysia to Tokyo

Explore weekly flight availability from Malaysia to Tokyo. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated 19 January 2026.

The most flights from MY0 to TYO are scheduled on a Monday (23 on average). You will have fewer flight options on Wednesday, which is when the least amount of flights are scheduled (22 on average).

How often are flights from Malaysia to Tokyo delayed?

About 14% of weekly flights between Malaysia and Tokyo have experienced delays in the past year, with the average delay time being 150 minutes.

What is the most punctual flight time for Malaysia to Tokyo flights?

Historically, flights departing in the early afternoon are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Tuesday tends to have the lowest number of delays on this route, whereas Wednesday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Malaysia to Tokyo flights?

Over the past year, ANA have had the lowest number of delays on this route, with just 6% of flights being delayed.

Reviews of airlines servicing Tokyo

Get insights into the airlines that provide service to Tokyo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Tokyo. Reviews last updated 19 January 2026.
Read reviews from past customers who have flown with ANA, Vietnam Airlines, andMalaysia Airlines from Malaysia to Tokyo. Users can see the overall rating for each airline as well as how each is rated in terms of entertainment options, comfort, food, crew/service, and boarding process.
ANA
8.4
Very Good
1,077 reviews
Check prices

Crew

8.7

Food

7.7

Boarding

8.5

Entertainment

7.9

Comfort

8.2

Overall

8.4

Reviews

1 / 20
10.0
Excellent

Lindsey,Jan 2026

CGK - HND

All of the flight attendants were very nice & attentive. The bathrooms were kept very clean. We have no complaints!
ANA
8.4
Very Good
1,077 reviews
ANA
8.4
Very Good
1,077 reviews
Check prices

Crew

8.7

Food

7.7

Boarding

8.5

Entertainment

7.9

Comfort

8.2

Overall

8.4

Reviews

1 / 20
10.0
Excellent

Lindsey,Jan 2026

CGK - HND

All of the flight attendants were very nice & attentive. The bathrooms were kept very clean. We have no complaints!
Vietnam Airlines
7.6
Good
220 reviews
ANA
8.4
Very Good
1,077 reviews
Check prices

Crew

8.7

Food

7.7

Boarding

8.5

Entertainment

7.9

Comfort

8.2

Overall

8.4

Reviews

1 / 20
10.0
Excellent

Lindsey,Jan 2026

CGK - HND

All of the flight attendants were very nice & attentive. The bathrooms were kept very clean. We have no complaints!
Malaysia Airlines
7.3
Good
290 reviews
ANA
8.4
Very Good
1,077 reviews
Check prices

Crew

8.7

Food

7.7

Boarding

8.5

Entertainment

7.9

Comfort

8.2

Overall

8.4

Reviews

1 / 20
10.0
Excellent

Lindsey,Jan 2026

CGK - HND

All of the flight attendants were very nice & attentive. The bathrooms were kept very clean. We have no complaints!
AirAsia X
6.4
Okay
44 reviews
ANA
8.4
Very Good
1,077 reviews
Check prices

Crew

8.7

Food

7.7

Boarding

8.5

Entertainment

7.9

Comfort

8.2

Overall

8.4

Reviews

1 / 20
10.0
Excellent

Lindsey,Jan 2026

CGK - HND

All of the flight attendants were very nice & attentive. The bathrooms were kept very clean. We have no complaints!
Batik Air
5.9
Fair
78 reviews
ANA
8.4
Very Good
1,077 reviews
Check prices

Crew

8.7

Food

7.7

Boarding

8.5

Entertainment

7.9

Comfort

8.2

Overall

8.4

Reviews

1 / 20
10.0
Excellent

Lindsey,Jan 2026

CGK - HND

All of the flight attendants were very nice & attentive. The bathrooms were kept very clean. We have no complaints!

Related info for your journey

Find useful and relevant information for your journey from Malaysia to Tokyo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How long is the flight from Malaysia to Tokyo?

    For as low as RM 1,358, Vietnam Airlines can have you in Tokyo from Malaysia in 17h 05m. Malaysia and Tokyo are separated by a distance of 5406 km. When browsing for deals, the options you’ll see will be for both direct flights and flights with stops.

  • What are the cheapest airlines to fly from Malaysia to Tokyo one-way?

    For one-way options, check prices for Singapore Airlines. According to our data, you can fly for as low as RM 42. Users have also found prices from RM 324 and RM 478 on AirAsia and Philippines AirAsia, respectively.

  • What are the most popular routes from Malaysia to Tokyo?

    The most popular flight routes from Malaysia to Tokyo are Kuala Lumpur Intl - Tokyo Narita, Kuala Lumpur Intl - Tokyo Haneda and Kuala Lumpur Subang - Tokyo Narita.

  • What are the most reliable airlines from Malaysia to Tokyo?

    Consider Alaska Airlines (95%), SriLankan Airlines (95%) or Hawaiian Airlines (95%) when booking your flight. These represent the most reliable airlines when flying from Malaysia to Tokyo.

  • What are the cheapest flights from Malaysia to Tokyo?

    Looking at all options, your cheapest flight can be booked for RM 717. While the most popular route (Kuala Lumpur Intl - Tokyo Narita) can be booked for RM 1,119 on average, our data indicates RM 4,313 when flying from Malaysia to Tokyo.

  • Can I find deals for flights from Malaysia to Tokyo that include hotel bookings?

    Yes. In addition to deals on Malaysia to Tokyo flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Malaysia to Tokyo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Malaysia to Tokyo.

  • Can I find deals for business class flights from Malaysia to Tokyo?

    Yes. Cheapflights offers flight deals from Malaysia to Tokyo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Malaysia to Tokyo?

    Currently, February is the cheapest month in which you can book a flight from Malaysia to Tokyo (average of RM 300). Flying from Malaysia to Tokyo in December is currently the most expensive (average of RM 1,310). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Travelling to a place near Tokyo?

Book flights to Tokyo if you plan to visit one of these locations
Chiba
Kamakura
Urayasu
Fujiyoshida
Hakone
Saitama
Kawasaki

Browse thousands of different options on Cheapflights for your next trip

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Alternative routes for Malaysia to Tokyo

See prices for flight routes from nearby airports that may be better suited for you.
Subang to Haneda flights
Penang to Narita flights
Penang to Haneda flights
Kota Kinabalu to Narita flights
Kota Kinabalu to Haneda flights
Senai to Haneda flights
Senai to Narita flights

Top 10 airlines flying from Malaysia to Tokyo

Discover the top 10 airlines that operate flights from Malaysia to Tokyo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 19 January 2026.
AirlineCheapestAverageFlexibilityOn-time
Singapore AirlinesCheapestRM 262AverageRM 2,596FlexibilityNo cancel feeOn-time81%
Search Singapore Airlines flights
ScootCheapestRM 993AverageRM 1,676FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
AirAsia XCheapestRM 1,029AverageRM 1,549FlexibilityNo cancel feeOn-time66%
Search AirAsia X flights
Philippines AirAsiaCheapestRM 1,030AverageRM 1,163FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
Philippine AirlinesCheapestRM 1,111AverageRM 1,451FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
Vietnam AirlinesCheapestRM 1,140AverageRM 1,298FlexibilityNo cancel feeOn-time81%
Search Vietnam Airlines flights
HK ExpressCheapestRM 1,165AverageRM 1,669FlexibilityNo cancel feeOn-time90%
Search HK Express flights
Batik AirCheapestRM 1,168AverageRM 1,807FlexibilityNo cancel feeOn-timeN/A
Search Batik Air flights
XiamenAirCheapestRM 1,170AverageRM 1,554FlexibilityNo cancel feeOn-time49%
Search XiamenAir flights
VietJet AirCheapestRM 1,177AverageRM 1,743FlexibilityNo cancel feeOn-timeN/A
Search VietJet Air flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Malaysia to Tokyo?

900+ travel sites are searched through when a user searches for a flight using Cheapflights. From the search interface, users can use filters to choose airlines, airports, flight times, cabin classes and more to their preference. Book your flight to Tokyo from Malaysia today with Cheapflights!

Why should you use Cheapflights to find cheap flight tickets from Malaysia to Tokyo?

Millions of users choose and trust Cheapflights to book the best flight deals from Malaysia to Tokyo for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Malaysia to Tokyo with no change fees?

Cheapflights does show flights with no change fees to all users. To see these options for flights from Malaysia to Tokyo, users can toggle the no change fees filter when performing a flight search.

Can Cheapflights notify me if prices for flights from Malaysia to Tokyo become cheaper?

Yes, and it’s super simple to set up. Click the bell icon next to the flight deals above and provide a valid email address to enable Price Alerts. That’s it!

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