Find flight deals from Malaysia to Japan

Cheapest flights from Malaysia to Japan
Explore the most affordable flight options available from Malaysia to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 22 May 2025.

Wed 18/606:45KUL - KIX

1 stop30h 20mMultiple Airlines

Wed 25/611:05KIX - KUL

Nonstop7h 00mMultiple Airlines

Deal found 21/5RM 1,153

Wed 11/614:10KUL - HND

Nonstop7h 25mAirAsia X

Sun 15/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,157

Tue 17/611:55KUL - NRT

1 stop17h 45mScoot

Tue 24/608:15NRT - KUL

1 stop10h 10mScoot

Deal found 21/5RM 1,157

Thu 19/618:00KUL - KIX

1 stop23h 40mMultiple Airlines

Sat 21/611:05KIX - KUL

Nonstop7h 00mMultiple Airlines

Deal found 21/5RM 1,157

Thu 12/614:10KUL - HND

Nonstop7h 25mAirAsia X

Tue 24/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,161

Sun 8/600:10KUL - NRT

Nonstop7h 15mMultiple Airlines

Wed 25/614:35NRT - KUL

1 stop22h 50mMultiple Airlines

Deal found 21/5RM 1,161

Tue 3/602:10KUL - KIX

Nonstop6h 40mMultiple Airlines

Mon 9/608:40KIX - KUL

1 stop17h 30mMultiple Airlines

Deal found 21/5RM 1,161

Fri 13/614:10KUL - HND

Nonstop7h 25mAirAsia X

Tue 17/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 22/5RM 1,165

Tue 10/600:20KUL - KIX

1 stop13h 15mMultiple Airlines

Sun 15/608:40KIX - KUL

1 stop28h 45mMultiple Airlines

Deal found 21/5RM 1,165

Sun 6/718:00KUL - NGO

1 stop16h 50mMultiple Airlines

Sun 13/713:20NGO - KUL

1 stop14h 20mMultiple Airlines

Deal found 22/5RM 1,170

Wed 11/614:10KUL - HND

Nonstop7h 25mAirAsia X

Wed 18/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,170

Thu 5/600:10KUL - NRT

Nonstop7h 15mBatik Air

Wed 11/610:25NRT - KUL

Nonstop7h 30mBatik Air

Deal found 21/5RM 1,170

Best flights from Malaysia to Japan
Discover carefully curated flight deals from Malaysia to Japan that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 22 May 2025.

Wed 18/606:45KUL - KIX

1 stop30h 20mMultiple Airlines

Wed 25/611:05KIX - KUL

Nonstop7h 00mMultiple Airlines

Deal found 21/5RM 1,153

Wed 11/614:10KUL - HND

Nonstop7h 25mAirAsia X

Sun 22/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,157

Tue 17/611:55KUL - NRT

1 stop17h 45mScoot

Tue 24/608:15NRT - KUL

1 stop10h 10mScoot

Deal found 21/5RM 1,157

Thu 5/600:10KUL - NRT

Nonstop7h 15mBatik Air

Wed 11/610:25NRT - KUL

Nonstop7h 30mBatik Air

Deal found 21/5RM 1,170

Sat 14/619:40PEN - NRT

1 stop17h 05mXiamenAir

Sat 21/614:55NRT - PEN

1 stop28h 35mXiamenAir

Deal found 21/5RM 1,302

Tue 10/620:00KUL - NRT

1 stop10h 35mVietnam Airlines

Tue 24/609:30NRT - KUL

1 stop9h 55mVietnam Airlines

Deal found 21/5RM 1,336

Sat 5/716:15KUL - HND

1 stop20h 25mPhilippine Airlines

Sat 12/715:05HND - KUL

1 stop21h 15mPhilippine Airlines

Deal found 21/5RM 1,396

Sat 5/713:35KUL - NGO

1 stop17h 55mVietJet Air

Sat 12/709:30NGO - KUL

1 stop28h 05mVietJet Air

Deal found 22/5RM 1,422

Sat 5/700:45KUL - UKB

1 stop16h 15mJuneyao Airlines

Sun 13/719:00UKB - KUL

1 stop29h 45mJuneyao Airlines

Deal found 21/5RM 1,447

Fri 20/601:30KUL - NRT

1 stop12h 30mChina Southern

Wed 25/614:35NRT - KUL

1 stop22h 50mChina Southern

Deal found 22/5RM 1,579

Thu 26/601:00PEN - NRT

1 stop17h 45mHK Express

Sun 29/608:00NRT - PEN

1 stop17h 15mHK Express

Deal found 20/5RM 1,588

Wed 11/604:05KUL - KIX

2 stops15h 55mChina Eastern

Wed 18/617:30KIX - KUL

2 stops32h 10mChina Eastern

Deal found 20/5RM 1,605

Direct flights from Malaysia to Japan
Explore direct flight options from Malaysia to Japan based on user searches, and compare prices and availability for your desired travel dates. Data last updated 22 May 2025.

Wed 11/614:10KUL - HND

Nonstop7h 25mAirAsia X

Sun 22/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,157

Thu 12/614:10KUL - HND

Nonstop7h 25mAirAsia X

Tue 24/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,161

Fri 13/614:10KUL - HND

Nonstop7h 25mAirAsia X

Tue 17/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 22/5RM 1,165

Wed 11/614:10KUL - HND

Nonstop7h 25mAirAsia X

Wed 18/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,170

Thu 5/600:10KUL - NRT

Nonstop7h 15mBatik Air

Wed 11/610:25NRT - KUL

Nonstop7h 30mBatik Air

Deal found 21/5RM 1,170

Wed 11/614:10KUL - HND

Nonstop7h 25mAirAsia X

Fri 13/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 20/5RM 1,174

Sat 7/614:10KUL - HND

Nonstop7h 25mAirAsia X

Wed 25/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,178

Mon 9/614:10KUL - HND

Nonstop7h 25mAirAsia X

Sun 22/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,182

Thu 5/614:10KUL - HND

Nonstop7h 25mAirAsia X

Sun 15/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 22/5RM 1,187

Thu 3/714:10KUL - HND

Nonstop7h 25mAirAsia X

Mon 14/723:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 20/5RM 1,191

Tue 27/512:45KUL - NRT

Nonstop7h 05mBatik Air

Fri 30/510:25NRT - KUL

Nonstop7h 30mBatik Air

Deal found 22/5RM 1,191

Wed 25/614:10KUL - HND

Nonstop7h 25mAirAsia X

Sun 29/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,195

Last-minute flights from Malaysia to Japan
Discover last-minute flight deals from Malaysia to Japan. Data last updated 22 May 2025 and is based on user searches.

Tue 27/514:30KUL - HND

Nonstop7h 05mAirAsia X

Mon 2/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,182

Tue 27/512:45KUL - NRT

Nonstop7h 05mBatik Air

Fri 30/510:25NRT - KUL

Nonstop7h 30mBatik Air

Deal found 22/5RM 1,191

Tue 27/514:30KUL - HND

Nonstop7h 05mAirAsia X

Fri 13/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,221

Tue 27/512:45KUL - NRT

Nonstop7h 05mBatik Air

Mon 2/610:25NRT - KUL

Nonstop7h 30mBatik Air

Deal found 21/5RM 1,221

Tue 27/512:45KUL - NRT

Nonstop7h 05mMultiple Airlines

Thu 5/608:15NRT - KUL

1 stop14h 15mMultiple Airlines

Deal found 22/5RM 1,276

Tue 27/512:45KUL - NRT

Nonstop7h 05mMultiple Airlines

Tue 3/608:15NRT - KUL

1 stop10h 10mMultiple Airlines

Deal found 21/5RM 1,289

Tue 27/512:45KUL - NRT

Nonstop7h 05mMultiple Airlines

Thu 12/616:15NRT - KUL

1 stop33h 15mMultiple Airlines

Deal found 21/5RM 1,306

Tue 27/502:10KUL - KIX

Nonstop6h 40mMultiple Airlines

Sun 1/608:40KIX - KUL

1 stop29h 45mMultiple Airlines

Deal found 21/5RM 1,315

Wed 28/519:15KUL - KIX

1 stop17h 50mMultiple Airlines

Sun 1/608:40KIX - KUL

1 stop17h 30mMultiple Airlines

Deal found 21/5RM 1,157

Wed 28/519:15KUL - KIX

1 stop17h 50mMultiple Airlines

Sun 1/611:05KIX - KUL

Nonstop7h 00mMultiple Airlines

Deal found 21/5RM 1,276

Wed 28/514:30KUL - HND

Nonstop7h 05mAirAsia X

Sun 1/623:50HND - KUL

Nonstop7h 20mAirAsia X

Deal found 21/5RM 1,319

Sat 31/509:35KUL - KIX

1 stop28h 00mMultiple Airlines

Sun 8/608:40KIX - KUL

1 stop29h 45mMultiple Airlines

Deal found 21/5RM 1,311

One-way flights from Malaysia to Japan
Search for one-way flight options from Malaysia to Japan. Find affordable one-way fares based on user searches. Data last updated 22 May 2025.

Tue 15/706:55PEN - NRT

2 stops34h 15mMultiple Airlines

Deal found 21/5RM 512

Tue 15/711:00PEN - NRT

1 stop18h 40mScoot

Deal found 21/5RM 559

Tue 15/706:55PEN - NRT

3 stops34h 15mMultiple Airlines

Deal found 21/5RM 564

Fri 6/614:10KUL - HND

Nonstop7h 25mAirAsia X

Deal found 21/5RM 598

Tue 10/600:10KUL - NRT

Nonstop7h 15mBatik Air

Deal found 21/5RM 598

Tue 27/522:00KUL - KIX

1 stop18h 00mMultiple Airlines

Deal found 22/5RM 598

Mon 26/514:30KUL - HND

Nonstop7h 05mAirAsia X

Deal found 21/5RM 602

Tue 3/600:10KUL - NRT

Nonstop7h 15mBatik Air

Deal found 21/5RM 602

Mon 18/800:55KUL - KIX

1 stop16h 45mCebu Pacific

Deal found 21/5RM 602

Thu 5/614:10KUL - HND

Nonstop7h 25mAirAsia X

Deal found 22/5RM 606

Sun 15/600:10KUL - NRT

Nonstop7h 15mBatik Air

Deal found 22/5RM 606

Sun 20/722:50KUL - KIX

1 stop14h 15mScoot

Deal found 21/5RM 606

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Cheap flights from Malaysia to Japan – Compare and Save

Find flight deals from Malaysia to Japan

Cheapest flights from Malaysia to JapanExplore the most affordable flight options available from Malaysia to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 22 May 2025.

Explore the most affordable flight options available from Malaysia to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 22 May 2025.

100% Free

Book with Flexibility

Travel Smart

Cheapest flights from Malaysia to Japan
Explore the most affordable flight options available from Malaysia to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 22 May 2025.