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Cheap flights from Kota Kinabalu to Tokyo from RM 691

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 23/6. Fares are subject to change and may not be available on all flights or dates of travel.
BKI — TYO
1 May — 8 May1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Kota Kinabalu to Tokyo

Enter your travel dates to find the best prices.

Cheapest flights from Kota Kinabalu to Tokyo
Explore the most affordable flight options available from Kota Kinabalu to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 1 April 2026.

Tue 23/607:30
BKI
-
HND
1 stop14h 05m
Multiple Airlines
Fri 26/623:50
HND
-
BKI
1 stop11h 40m
Multiple Airlines
Deal found 30/3RM 1,184
Mon 11/501:15
BKI
-
NRT
1 stop13h 50m
HK Express
Tue 19/508:00
NRT
-
BKI
1 stop17h 30m
HK Express
Deal found 28/3RM 1,414
Fri 15/501:15
BKI
-
NRT
1 stop18h 25m
HK Express
Sat 23/521:35
NRT
-
BKI
1 stop27h 55m
HK Express
Deal found 31/3RM 1,427
Wed 13/501:15
BKI
-
NRT
1 stop16h 10m
Multiple Airlines
Thu 21/516:50
NRT
-
BKI
1 stop28h 15m
Multiple Airlines
Deal found 30/3RM 1,455
Wed 1/709:50
BKI
-
NRT
1 stop20h 15m
Multiple Airlines
Wed 8/711:10
NRT
-
BKI
1 stop15h 10m
Multiple Airlines
Deal found 31/3RM 1,507
Sat 16/520:45
BKI
-
HND
1 stop27h 20m
Scoot
Fri 22/502:20
HND
-
BKI
1 stop18h 25m
Scoot
Deal found 31/3RM 1,532
Tue 8/906:00
BKI
-
HND
1 stop15h 35m
Multiple Airlines
Fri 11/902:20
HND
-
BKI
1 stop18h 25m
Multiple Airlines
Deal found 28/3RM 1,548
Thu 14/501:15
BKI
-
HND
1 stop20h 40m
HK Express
Fri 22/506:35
HND
-
BKI
1 stop18h 55m
HK Express
Deal found 30/3RM 1,580
Fri 1/507:45
BKI
-
NRT
2 stops29h 00m
Multiple Airlines
Fri 8/521:15
NRT
-
BKI
2 stops23h 30m
Multiple Airlines
Deal found 1/4RM 1,596
Mon 13/401:15
BKI
-
NRT
1 stop12h 30m
HK Express
Thu 16/415:45
NRT
-
BKI
1 stop9h 45m
HK Express
Deal found 30/3RM 1,608
Mon 11/501:15
BKI
-
NRT
1 stop13h 50m
Multiple Airlines
Tue 19/521:15
NRT
-
BKI
2 stops12h 35m
Multiple Airlines
Deal found 28/3RM 1,612
Tue 12/507:45
BKI
-
HND
1 stop16h 00m
Multiple Airlines
Mon 18/502:20
HND
-
BKI
1 stop31h 30m
Multiple Airlines
Deal found 28/3RM 1,612

Find flight deals from Kota Kinabalu to Tokyo

Discover tips and strategies to find the most affordable flight options for your journey from Kota Kinabalu (BKI) to Tokyo (TYO). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 1 April 2026.

Round-trip from

RM 1,184

One-way from

RM 691

Popular in

December

Cheapest in

July

Average price

RM 1,556

Good one-way deal

RM 1,532 or less
23/6-26/6
  • 23/6-26/6
  • 2 total stops
  • 25h 45m total
  • Kota Kinabalu to Tokyo
Search Deals
HK Express
  • HK Express
  • 23/6
  • 1 total stop
  • 12h 30m total
  • Kota Kinabalu to Tokyo
Search Deals
Highest demand for flights based on searches. 6% potential increase in price (RM 455 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (RM 107 potential savings vs. average return price).
Search Deals
Average for round-trip flights in April 2026
Search Deals
Price to beat on a one-way flight from Kota Kinabalu to Tokyo (TYO).
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Kota Kinabalu to Tokyo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 1 April 2026.
Use the filters below to find and compare flights from Kota Kinabalu to Tokyo that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Wed 1/7

09:50-06:10

2 stops19h 20m

Tokyo Narita

Wed 8/7

11:10-01:20

1 stop15h 10m

RM 1,532

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Thu 14/5

01:15-22:55

1 stop20h 40m

Tokyo Haneda

Fri 22/5

06:35-00:30

1 stop18h 55m

RM 1,580

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Tue 23/6

20:40-08:00

2 stops34h 20m

Tokyo Narita

Fri 26/6

18:30-23:30

1 stop30h 00m

RM 1,689

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Tue 12/5

07:45-00:45

1 stop16h 00m

Tokyo Haneda

Fri 15/5

02:20-19:45

1 stop18h 25m

RM 1,790

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Fri 1/5

06:45-01:05

3 stops41h 20m

Tokyo Haneda

Thu 7/5

02:20-19:45

1 stop18h 25m

RM 1,794

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Fri 1/5

20:45-01:05

1 stop27h 20m

Tokyo Haneda

Thu 7/5

02:20-19:45

1 stop18h 25m

RM 1,810

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Mon 8/6

01:30-16:00

2 stops37h 30m

Tokyo Haneda

Wed 10/6

20:00-00:30

1 stop29h 30m

RM 1,831

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Thu 14/5

09:20-01:20

1 stop15h 00m

Tokyo Haneda

Wed 20/5

02:00-16:35

1 stop15h 35m

RM 1,843
Fastest return journey

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Tue 14/4

19:00-12:05

2 stops16h 05m

Tokyo Narita

Thu 16/4

15:45-00:30

1 stop9h 45m

RM 1,871

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Thu 30/4

07:45-20:00

1 stop11h 15m

Tokyo Narita

Tue 5/5

08:20-08:50

1 stop25h 30m

RM 1,899

Flights are sorted by cheapest return flights first.

Deals found on 31/3

Showing 1-10 of 28 resultsSorted by cheapest first
1
2
3

Best time to book a flight from Kota Kinabalu to Tokyo

Have a flexible travel schedule? Discover the best time to fly to Tokyo from Kota Kinabalu with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Kota Kinabalu to Tokyo

How far ahead should I book a flight from Kota Kinabalu to Tokyo?

Use this chart to determine the optimal time to book a return flight from Kota Kinabalu to Tokyo. Price data was last updated on 13 March 2026.

The price you pay for your flight from Kota Kinabalu to Tokyo may vary depending on when you book. For the best chance of a lower fare, look to book 30 days in advance of your trip. Fares are likely to increase a fortnight or so before your departure date.

What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Tokyo (average of RM 776). Flying from Kota Kinabalu to Tokyo in February is currently the most expensive (average of RM 1,560). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How much does it cost for a return flight from Kota Kinabalu to Tokyo?

What’s the top stopover airport for flights from Kota Kinabalu to Tokyo?

Share of one-stop return flights from Kota Kinabalu to Tokyo chosen by Cheapflights users in the past 12 months, using the same stopover each way.

Shanghai (PVG) – chosen by Cheapflights users on 35% of one-stop itineraries from Kota Kinabalu to Tokyo on Cheapflights.

What’s the cheapest stopover airport for flights from Kota Kinabalu to Tokyo?

Average return fare for one-stop flights from Kota Kinabalu to Tokyo, chosen by Cheapflights users in the past 12 months, with the same stopover each way.

Manila (MNL) is the most affordable one-stop option, with an average return flight price of RM 1,213.

What’s the fastest stopover option from Kota Kinabalu to Tokyo?

Shortest average travel time for one-stop one-way flights from Kota Kinabalu to Tokyo, based on itineraries clicked by Cheapflights users over the past 12 months, grouped by stopover airport.

Flights via Bandar Seri Begawan (BWN) have the shortest average one-way travel time for one-stop routes: 9h 25m.

Which airport typically offers the quickest stopover for flights from Kota Kinabalu to Tokyo?

Average stopover duration for one-stop one-way flights from Kota Kinabalu to Tokyo, chosen by Cheapflights users in the last 12 months, grouped by stopover airport.

Flights via Kuala Lumpur (KUL) offer the fastest connection on this route, with an average stopover time of 1h 30m.

How often are flights from Kota Kinabalu to Tokyo delayed?

About 8% of weekly flights between Kota Kinabalu and Tokyo have experienced delays in the past year, with the average delay time being 39 minutes.

What is the most punctual flight time for Kota Kinabalu to Tokyo flights?

Historically, flights departing at night are less likely to be delayed, whereas flights leaving in the early afternoon tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Monday tends to have the lowest number of delays on this route, whereas Thursday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Kota Kinabalu to Tokyo flights?

Over the past year, Malaysia Airlines have had the lowest number of delays on this route, with just 9% of flights being delayed.

Reviews of airlines servicing Tokyo

Get insights into the airlines that provide service to Tokyo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Tokyo. Reviews last updated 1 April 2026.
See what other customers who have flown with China Southern,HK Express, andChina Eastern from Kota Kinabalu to Tokyo have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
China Southern
7.4
Good
146 reviews
Check prices

Comfort

7.6

Entertainment

7.1

Boarding

7.7

Overall

7.4

Crew

8.0

Food

7.2

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
China Southern
7.4
Good
146 reviews
China Southern
7.4
Good
146 reviews
Check prices

Comfort

7.6

Entertainment

7.1

Boarding

7.7

Overall

7.4

Crew

8.0

Food

7.2

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
HK Express
7.3
Good
44 reviews
China Southern
7.4
Good
146 reviews
Check prices

Comfort

7.6

Entertainment

7.1

Boarding

7.7

Overall

7.4

Crew

8.0

Food

7.2

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
China Eastern
7.2
Good
200 reviews
China Southern
7.4
Good
146 reviews
Check prices

Comfort

7.6

Entertainment

7.1

Boarding

7.7

Overall

7.4

Crew

8.0

Food

7.2

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
Philippines AirAsia
6.8
Okay
126 reviews
China Southern
7.4
Good
146 reviews
Check prices

Comfort

7.6

Entertainment

7.1

Boarding

7.7

Overall

7.4

Crew

8.0

Food

7.2

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
Scoot
6.7
Okay
322 reviews
China Southern
7.4
Good
146 reviews
Check prices

Comfort

7.6

Entertainment

7.1

Boarding

7.7

Overall

7.4

Crew

8.0

Food

7.2

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5

Related info for your journey

Find useful and relevant information for your journey from Kota Kinabalu to Tokyo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Kota Kinabalu to Tokyo?

    Kota Kinabalu (BKI), located 5.8 km from the city centre, is the airport you fly out of when you book flights from Kota Kinabalu to Tokyo. 6 airlines have flights from Kota Kinabalu to Tokyo on a regular basis. Booking flights from Kota Kinabalu to Tokyo should not be difficult; the airport handles an average of 0 outbound flights to Tokyo per day.

  • How long is the flight from Kota Kinabalu to Tokyo?

    Departing from Kota Kinabalu to Tokyo will take you 20h 40m. Airlines will cover a distance of 4088 km. Both multi-stop and direct flights can be found to your destination and back.

  • What are the cheapest airlines flying from Kota Kinabalu to Tokyo round-trip?

    Our cheapest airline available from Kota Kinabalu to Tokyo is Philippines AirAsia. Our recent data shows that you can find tickets from as low as RM 1,026 on this airline. Additional options worth looking into are Scoot and HK Express, starting at RM 1,192 and RM 1,325 round-trip. Users have found that Philippines AirAsia is 37% cheaper than the other options available to this destination.

  • Can I find deals for flights from Kota Kinabalu to Tokyo that include hotel bookings?

    Yes. In addition to deals on Kota Kinabalu to Tokyo flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Kota Kinabalu to Tokyo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Kota Kinabalu to Tokyo.

  • Can I find deals for business class flights from Kota Kinabalu to Tokyo?

    Yes. Cheapflights offers flight deals from Kota Kinabalu to Tokyo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

    Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Tokyo (average of RM 776). Flying from Kota Kinabalu to Tokyo in February is currently the most expensive (average of RM 1,560). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Travelling to a place near Tokyo?

Book flights to Tokyo if you plan to visit one of these locations
Chiba
Kamakura
Urayasu
Fujiyoshida
Hakone
Saitama
Kawasaki

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Fly from Kota Kinabalu to Tokyo on these airlines

Choose from the following airlines for your flight from Kota Kinabalu to Tokyo. Flights are based on user searches made on Cheapflights and were last updated on 1 April 2026.
Scoot flights from Kota Kinabalu to Tokyo
JAL flights from Kota Kinabalu to Tokyo

Top 6 airlines flying from Kota Kinabalu to Tokyo

Discover the top 6 airlines that operate flights from Kota Kinabalu to Tokyo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 1 April 2026.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapestRM 1,026AverageRM 1,159FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
ScootCheapestRM 1,192AverageRM 1,746FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
HK ExpressCheapestRM 1,325AverageRM 1,592FlexibilityNo cancel feeOn-time90%
Search HK Express flights
China EasternCheapestRM 1,390AverageRM 1,599FlexibilityNo cancel feeOn-time62%
Search China Eastern flights
Malaysia AirlinesCheapestRM 1,661AverageRM 2,173FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
Batik AirCheapestRM 1,827AverageRM 1,891FlexibilityNo cancel feeOn-timeN/A
Search Batik Air flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Kota Kinabalu to Tokyo?

Cheapflights makes it easy to find Kota Kinabalu to Tokyo flights by helping our users search from 900+ travel sites for deals. We also provide you with filters for cabin, price, airline, airports, number of stops, and many more to narrow down that perfect flight.

Why should you use Cheapflights to find cheap flight tickets from Kota Kinabalu to Tokyo?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Kota Kinabalu to Tokyo for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Kota Kinabalu to Tokyo with no change fees?

Yes! Cheapflights helps users easily find flights from Kota Kinabalu to Tokyo with no change fees.

Can Cheapflights notify me if prices for flights from Kota Kinabalu to Tokyo become cheaper?

Yes! Start tracking prices for Kota Kinabalu to Tokyo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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