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Cheap flights from Kota Kinabalu to Tokyo from RM 794

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 27/6. Fares are subject to change and may not be available on all flights or dates of travel.
BKI — TYO
30 Jun — 7 Jul1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Kota Kinabalu to Tokyo

Enter your travel dates to find the best prices.

Cheapest flights from Kota Kinabalu to Tokyo
Explore the most affordable flight options available from Kota Kinabalu to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 31 May 2026.

Thu 2/700:35
BKI
-
NRT
1 stop16h 30m
Jin Air
Sun 5/719:15
NRT
-
BKI
1 stop29h 20m
Jin Air
Deal found 28/5RM 1,698
Thu 10/912:15
BKI
-
HND
1 stop11h 50m
Scoot
Mon 21/902:20
HND
-
BKI
1 stop31h 30m
Scoot
Deal found 26/5RM 1,750
Fri 3/700:35
BKI
-
NRT
1 stop9h 00m
Jin Air
Sat 11/718:25
NRT
-
BKI
1 stop30h 10m
Jin Air
Deal found 26/5RM 1,754
Thu 22/1001:15
BKI
-
NRT
1 stop17h 30m
Multiple Airlines
Thu 29/1019:55
NRT
-
BKI
2 stops24h 05m
Multiple Airlines
Deal found 28/5RM 1,762
Sat 31/1001:30
BKI
-
NRT
1 stop16h 35m
Multiple Airlines
Tue 10/1115:30
NRT
-
BKI
1 stop21h 35m
Multiple Airlines
Deal found 29/5RM 1,786
Thu 22/1001:15
BKI
-
NRT
1 stop18h 25m
HK Express
Thu 29/1019:00
NRT
-
BKI
1 stop30h 30m
HK Express
Deal found 28/5RM 1,794
Fri 23/1020:45
BKI
-
HND
1 stop27h 20m
Multiple Airlines
Wed 28/1001:55
HND
-
BKI
1 stop23h 35m
Multiple Airlines
Deal found 28/5RM 1,798
Tue 2/601:15
BKI
-
NRT
1 stop12h 30m
Multiple Airlines
Tue 9/618:30
NRT
-
BKI
1 stop30h 00m
Multiple Airlines
Deal found 29/5RM 1,841
Wed 3/620:30
BKI
-
HND
1 stop27h 35m
Multiple Airlines
Tue 9/605:25
HND
-
BKI
1 stop18h 00m
Multiple Airlines
Deal found 29/5RM 1,869
Mon 5/1009:50
BKI
-
HND
1 stop14h 15m
Scoot
Thu 15/1002:20
HND
-
BKI
1 stop18h 25m
Scoot
Deal found 30/5RM 1,905
Thu 1/1001:15
BKI
-
NRT
1 stop17h 30m
HK Express
Sat 17/1015:45
NRT
-
BKI
1 stop9h 45m
HK Express
Deal found 28/5RM 1,944
Wed 9/901:15
BKI
-
NRT
1 stop12h 30m
HK Express
Tue 22/915:45
NRT
-
BKI
1 stop9h 45m
HK Express
Deal found 26/5RM 1,948

Find flight deals from Kota Kinabalu to Tokyo

Discover tips and strategies to find the most affordable flight options for your journey from Kota Kinabalu (BKI) to Tokyo (TYO). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 31 May 2026.

Round-trip from

RM 1,698

One-way from

RM 794

Popular in

January

Cheapest in

July

Average price

RM 1,869
Jin Air
  • Jin Air
  • 2/7-5/7
  • 2 total stops
  • 45h 50m total
  • Kota Kinabalu to Tokyo
Search Deals
Jin Air
  • Jin Air
  • 27/6
  • 1 total stop
  • 9h 00m total
  • Kota Kinabalu to Tokyo
Search Deals
Highest demand for flights based on searches. 11% potential increase in price (RM 841 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (RM 107 potential savings vs. average return price).
Search Deals
Average for round-trip flights in May 2026
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Kota Kinabalu to Tokyo that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 31 May 2026.
Use the filters below to find and compare flights from Kota Kinabalu to Tokyo that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Fri 3/7

00:35-10:35

1 stop9h 00m

Tokyo Narita

Sat 11/7

18:25-23:35

1 stop30h 10m

RM 1,754

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Sat 31/10

01:30-19:05

1 stop16h 35m

Tokyo Narita

Tue 10/11

15:30-12:05

1 stop21h 35m

RM 1,786
Fastest return journey

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Wed 9/9

01:15-14:45

1 stop12h 30m

Tokyo Narita

Tue 22/9

15:45-00:30

1 stop9h 45m

RM 1,948

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Tue 30/6

01:15-18:25

1 stop16h 10m

Tokyo Narita

Sun 12/7

08:20-08:50

1 stop25h 30m

RM 1,988

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Fri 3/7

00:35-10:35

1 stop9h 00m

Tokyo Narita

Sat 11/7

08:20-07:25

2 stops24h 05m

RM 2,012

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Tue 30/6

01:15-01:20

1 stop23h 05m

Tokyo Haneda

Sun 12/7

06:35-00:30

1 stop18h 55m

RM 2,044

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Wed 9/9

01:15-22:55

1 stop20h 40m

Tokyo Haneda

Tue 22/9

12:00-08:50

2 stops21h 50m

RM 2,067

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Sat 21/11

13:05-13:40

1 stop23h 35m

Tokyo Narita

Sat 28/11

15:30-12:05

1 stop21h 35m

RM 2,103

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Mon 5/10

20:30-20:00

2 stops22h 30m

Tokyo Narita

Fri 16/10

21:15-19:45

2 stops23h 30m

RM 2,143

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Thu 1/10

01:15-20:40

1 stop18h 25m

Tokyo Narita

Sat 3/10

08:20-19:45

1 stop12h 25m

RM 2,230

Flights are sorted by cheapest return flights first.

Deals found on 27/5

Showing 1-10 of 39 resultsSorted by cheapest first
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Best time to book a flight from Kota Kinabalu to Tokyo

Have a flexible travel schedule? Discover the best time to fly to Tokyo from Kota Kinabalu with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Kota Kinabalu to Tokyo

What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Tokyo (average of RM 587). Flying from Kota Kinabalu to Tokyo in February is currently the most expensive (average of RM 1,345). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How much does it cost for a return flight from Kota Kinabalu to Tokyo?

What’s the top stopover airport for flights from Kota Kinabalu to Tokyo?

Share of one-stop return flights from Kota Kinabalu to Tokyo chosen by Cheapflights users in the past 12 months, using the same stopover each way.

Shanghai (PVG) – chosen by Cheapflights users on 36% of one-stop itineraries from Kota Kinabalu to Tokyo on Cheapflights.

What’s the cheapest stopover airport for flights from Kota Kinabalu to Tokyo?

Average return fare for one-stop flights from Kota Kinabalu to Tokyo, chosen by Cheapflights users in the past 12 months, with the same stopover each way.

Manila (MNL) is the most affordable one-stop option, with an average return flight price of RM 1,193.

What’s the fastest stopover option from Kota Kinabalu to Tokyo?

Shortest average travel time for one-stop one-way flights from Kota Kinabalu to Tokyo, based on itineraries clicked by Cheapflights users over the past 12 months, grouped by stopover airport.

Flights via Bandar Seri Begawan (BWN) have the shortest average one-way travel time for one-stop routes: 9h 00m.

Which airport typically offers the quickest stopover for flights from Kota Kinabalu to Tokyo?

Average stopover duration for one-stop one-way flights from Kota Kinabalu to Tokyo, chosen by Cheapflights users in the last 12 months, grouped by stopover airport.

Flights via Kuala Lumpur (KUL) offer the fastest connection on this route, with an average stopover time of 1h 30m.

How often are flights from Kota Kinabalu to Tokyo delayed?

About 0% of weekly flights between Kota Kinabalu and Tokyo have experienced delays in the past year, with the average delay time being 0 minutes.

What is the most punctual flight time for Kota Kinabalu to Tokyo flights?

Historically, flights departing at night are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Tuesday tends to have the lowest number of delays on this route, whereas Saturday has historically faced a higher average of delays compared to other days of the week.

How far ahead should I book a flight from Kota Kinabalu to Tokyo?

The price you pay for your flight from Kota Kinabalu to Tokyo may vary depending on when you book. For the best chance of a lower fare, look to book 18 days in advance of your trip. Fares are likely to increase a fortnight or so before your departure date.

Reviews of airlines servicing Tokyo

Get insights into the airlines that provide service to Tokyo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Tokyo. Reviews last updated 31 May 2026.
See what other customers who have flown with China Southern,China Eastern, andHK Express from Kota Kinabalu to Tokyo have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
China Southern
7.5
Good
152 reviews
Check prices

Boarding

7.9

Entertainment

7.2

Crew

8.1

Overall

7.5

Food

7.3

Comfort

7.7

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
China Southern
7.5
Good
152 reviews
China Southern
7.5
Good
152 reviews
Check prices

Boarding

7.9

Entertainment

7.2

Crew

8.1

Overall

7.5

Food

7.3

Comfort

7.7

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
China Eastern
7.3
Good
219 reviews
China Southern
7.5
Good
152 reviews
Check prices

Boarding

7.9

Entertainment

7.2

Crew

8.1

Overall

7.5

Food

7.3

Comfort

7.7

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
HK Express
7.3
Good
45 reviews
China Southern
7.5
Good
152 reviews
Check prices

Boarding

7.9

Entertainment

7.2

Crew

8.1

Overall

7.5

Food

7.3

Comfort

7.7

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
Philippines AirAsia
6.8
Okay
126 reviews
China Southern
7.5
Good
152 reviews
Check prices

Boarding

7.9

Entertainment

7.2

Crew

8.1

Overall

7.5

Food

7.3

Comfort

7.7

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5
Scoot
6.7
Okay
325 reviews
China Southern
7.5
Good
152 reviews
Check prices

Boarding

7.9

Entertainment

7.2

Crew

8.1

Overall

7.5

Food

7.3

Comfort

7.7

Reviews

1 / 7
2.0
Mediocre

Anonymous,Mar 2026

NRT - CAN

The reclinjng didnot work in our seats. The TV didnot work. The crew was not helpful. The food was awful. Overall very very poor experience. I traveled with the family of 5

Related info for your journey

Find useful and relevant information for your journey from Kota Kinabalu to Tokyo. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Kota Kinabalu to Tokyo?

    Kota Kinabalu (BKI), located 5.8 km from the city centre, is the airport you fly out of when you book flights from Kota Kinabalu to Tokyo. 3 airlines have flights from Kota Kinabalu to Tokyo on a regular basis. Booking flights from Kota Kinabalu to Tokyo should not be difficult; the airport handles an average of 0 outbound flights to Tokyo per day.

  • How long is the flight from Kota Kinabalu to Tokyo?

    Departing from Kota Kinabalu to Tokyo will take you 9h. Airlines will cover a distance of 4142 km. Both multi-stop and direct flights can be found to your destination and back.

  • What are the cheapest airlines flying from Kota Kinabalu to Tokyo round-trip?

    Our cheapest airline available from Kota Kinabalu to Tokyo is Scoot. Our recent data shows that you can find tickets from as low as RM 1,170 on this airline. Additional options worth looking into are HK Express and China Eastern, starting at RM 1,301 and RM 1,425 round-trip. Users have found that Scoot is 29% cheaper than the other options available to this destination.

  • Can I find deals for flights from Kota Kinabalu to Tokyo that include hotel bookings?

    Yes. In addition to deals on Kota Kinabalu to Tokyo flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Kota Kinabalu to Tokyo?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Kota Kinabalu to Tokyo.

  • Can I find deals for business class flights from Kota Kinabalu to Tokyo?

    Yes. Cheapflights offers flight deals from Kota Kinabalu to Tokyo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

    Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Tokyo (average of RM 587). Flying from Kota Kinabalu to Tokyo in February is currently the most expensive (average of RM 1,345). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Travelling to a place near Tokyo?

Book flights to Tokyo if you plan to visit one of these locations
Chiba
Kamakura
Urayasu
Hakone
Fujiyoshida
Saitama
Kawasaki

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Fly from Kota Kinabalu to Tokyo on these airlines

Choose from the following airlines for your flight from Kota Kinabalu to Tokyo. Flights are based on user searches made on Cheapflights and were last updated on 31 May 2026.
Scoot flights from Kota Kinabalu to Tokyo
JAL flights from Kota Kinabalu to Tokyo

Top 3 airlines flying from Kota Kinabalu to Tokyo

Discover the top 3 airlines that operate flights from Kota Kinabalu to Tokyo. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 31 May 2026.
AirlineCheapestAverageFlexibilityOn-time
ScootCheapestRM 1,170AverageRM 1,715FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
HK ExpressCheapestRM 1,301AverageRM 1,563FlexibilityNo cancel feeOn-time90%
Search HK Express flights
China EasternCheapestRM 1,425AverageRM 1,760FlexibilityNo cancel feeOn-time62%
Search China Eastern flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Kota Kinabalu to Tokyo?

Cheapflights makes it easy to find Kota Kinabalu to Tokyo flights by helping our users search from 900+ travel sites for deals. We also provide you with filters for cabin, price, airline, airports, number of stops, and many more to narrow down that perfect flight.

Why should you use Cheapflights to find cheap flight tickets from Kota Kinabalu to Tokyo?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Kota Kinabalu to Tokyo for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Kota Kinabalu to Tokyo with no change fees?

Yes! Cheapflights helps users easily find flights from Kota Kinabalu to Tokyo with no change fees.

Can Cheapflights notify me if prices for flights from Kota Kinabalu to Tokyo become cheaper?

Yes! Start tracking prices for Kota Kinabalu to Tokyo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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