How long is the flight from Kota Kinabalu to Tokyo?

Departing from Kota Kinabalu to Tokyo will take you 13h. Airlines will cover a distance of 4142 km. Both multi-stop and direct flights can be found to your destination and back.

What are the cheapest airlines flying from Kota Kinabalu to Tokyo round-trip?

Our cheapest airline available from Kota Kinabalu to Tokyo is HK Express. Our recent data shows that you can find tickets from as low as RM 1,338 on this airline. Additional options worth looking into are China Eastern and Scoot, starting at RM 1,469 and RM 1,651 round-trip. Users have found that HK Express is 28% cheaper than the other options available to this destination.

In terms of precipitation, rainfall in Tokyo ranges from 50.0 - 210.0 inches per month. September is typically the wettest month, when rainfall can reach 210.0 mm. January is typically the driest time to visit Tokyo when rainfall is around 50.0 mm.

If weather is an important factor for your trip to Tokyo, use this chart to help with planning. For those seeking warmer temperatures, August is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travellers hoping to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 6.0 C).

What are the most popular airlines that fly from Kota Kinabalu to Tokyo?

China Eastern, HK Express and Scoot are the most popular airlines when flying from Kota Kinabalu to Tokyo.

What is the cheapest time of day to fly from BKI to TYO?

When flying from Kota Kinabalu to Tokyo, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

What airport do you fly from for flights from Kota Kinabalu to Tokyo?

Kota Kinabalu (BKI), located 5.8 km from the city centre, is the airport you fly out of when you book flights from Kota Kinabalu to Tokyo. 4 airlines have flights from Kota Kinabalu to Tokyo on a regular basis. Booking flights from Kota Kinabalu to Tokyo should not be difficult; the airport handles an average of 0 outbound flights to Tokyo per day.

Can I find deals for flights from Kota Kinabalu to Tokyo that include hotel bookings?

Yes. In addition to deals on Kota Kinabalu to Tokyo flights, Cheapflights offers holiday packages that include both flights and hotel.

How can I find direct flights from Kota Kinabalu to Tokyo?

After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Kota Kinabalu to Tokyo.

Can I find deals for business class flights from Kota Kinabalu to Tokyo?

Yes. Cheapflights offers flight deals from Kota Kinabalu to Tokyo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

RM 779+ Cheap Flights from Kota Kinabalu to Tokyo

Cheap flight deals from Kota Kinabalu to Tokyo

Enter your travel dates to find the best prices.

Cheapest

Best

Last-minute

One-way

Cheapest flights from Kota Kinabalu to Tokyo
Explore the most affordable flight options available from Kota Kinabalu to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 20 October 2026.

Sat 7/1101:30 -

1 stop28h 35m

Tue 24/1115:25 -

1 stop10h 10m

Deal found 18/10RM 1,693

Sat 7/1101:30 -

1 stop22h 15m

Mon 23/1101:55 -

1 stop23h 40m

Deal found 18/10RM 1,693

Sat 14/1101:30 -

1 stop16h 35m

Mon 16/1120:05 -

1 stop29h 30m

Deal found 20/10RM 1,722

Sat 14/1101:30 -

1 stop26h 15m

Mon 16/1123:55 -

1 stop25h 40m

Deal found 20/10RM 1,722

Wed 2/1201:30 -

1 stop20h 15m

Wed 9/1201:55 -

1 stop23h 40m

Deal found 18/10RM 1,734

Wed 2/1201:30 -

1 stop11h 55m

Thu 10/1215:25 -

1 stop10h 10m

Deal found 19/10RM 1,807

Mon 7/1201:30 -

1 stop22h 15m

Mon 21/1201:55 -

1 stop23h 40m

Deal found 16/10RM 1,807

Thu 5/1101:30 -

1 stop16h 35m

Fri 13/1115:25 -

1 stop10h 10m

Deal found 17/10RM 1,820

Mon 16/1101:30 -

1 stop18h 20m

Mon 23/1101:55 -

1 stop23h 40m

Deal found 20/10RM 1,836

Thu 5/1101:30 -

1 stop22h 15m

Fri 13/1123:55 -

1 stop25h 40m

Deal found 17/10RM 1,848

Mon 7/1201:30 -

1 stop16h 35m

Tue 22/1219:00 -

1 stop30h 35m

Deal found 16/10RM 1,868

Wed 2/1201:30 -

1 stop20h 15m

Thu 10/1215:05 -

1 stop10h 25m

Deal found 19/10RM 1,868

Best flights from Kota Kinabalu to Tokyo
Discover carefully curated flight deals from Kota Kinabalu to Tokyo that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 20 October 2026.

Sat 7/1101:30 -

1 stop22h 15m

Mon 23/1101:55 -

1 stop23h 40m

Deal found 18/10RM 1,693

Fri 6/1107:35 -

2 stops13h 50m

Fri 13/1115:25 -

1 stop10h 10m

Deal found 17/10RM 2,121

Tue 17/1101:30 -

1 stop13h 00m

Sat 28/1121:35 -

1 stop28h 00m

Deal found 17/10RM 2,256

Mon 8/301:45 -

1 stop10h 50m

Sun 14/310:45 -

1 stop14h 45m

Deal found 15/10RM 2,721

Tue 3/1101:30 -

1 stop16h 00m

Wed 11/1108:40 -

1 stop16h 50m

Deal found 17/10RM 3,337

Sat 14/1101:30 -

1 stop26h 15m

Mon 16/1123:55 -

1 stop25h 40m

Deal found 20/10RM 1,722

Mon 7/1201:30 -

2 stops14h 00m

Mon 21/1201:55 -

1 stop23h 40m

Deal found 16/10RM 2,138

Tue 3/1101:30 -

1 stop28h 00m

Wed 11/1118:10 -

1 stop31h 25m

Deal found 19/10RM 2,256

Wed 2/1201:30 -

2 stops19h 35m

Thu 10/1207:30 -

2 stops18h 05m

Deal found 19/10RM 2,211

Tue 3/1107:05 -

1 stop14h 35m

Fri 6/1123:55 -

1 stop25h 40m

Deal found 19/10RM 2,223

Sat 14/1107:05 -

2 stops16h 55m

Sat 21/1123:55 -

1 stop13h 50m

Deal found 16/10RM 2,562

Fri 25/1213:05 -

2 stops34h 45m

Fri 8/105:45 -

2 stops19h 50m

Deal found 16/10RM 2,795

Thu 5/1101:30 -

2 stops20h 15m

Fri 13/1106:35 -

1 stop10h 40m

Deal found 17/10RM 2,852

Thu 3/1206:05 -

2 stops17h 55m

Wed 9/1201:55 -

3 stops21h 55m

Deal found 18/10RM 3,256

Wed 4/1110:05 -

1 stop11h 35m

Wed 11/1123:55 -

1 stop13h 05m

Deal found 16/10RM 3,345

Find flight deals from Kota Kinabalu to Tokyo

Round-trip from	RM 1,693
One-way from	RM 779
Popular in	December
Cheapest in	July
Average price	RM 2,040

HK Express
7/11-24/11
2 total stops
38h 45m total
Kota Kinabalu to Tokyo

Search Deals

15/11-31/12
1 total stop
33h 15m total
Kota Kinabalu to Tokyo

Search Deals

Highest demand for flights based on searches. 6% potential increase in price (RM 519 potential increase over avg. return price).

Search Deals

Cheapest flight prices on average. 1% potential price decrease (RM 142 potential savings vs. average return price).

Search Deals

Average for round-trip flights in October 2026

Search Deals

Cheapflights Fare Finder

Use the filters below to find and compare flights from Kota Kinabalu to Tokyo that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight

Kota KinabaluTokyo

BKI Kota Kinabalu - HND Tokyo Haneda

BKIHND

Kota Kinabalu

Sat 14/11

01:30-22:45

1 stop20h 15m

Tokyo Haneda

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 857

Kota KinabaluTokyo

BKI Kota Kinabalu - NRT Tokyo Narita

BKINRT

Kota Kinabalu

Sat 27/2

01:30-19:05

1 stop16h 35m

Tokyo Narita

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 869

Kota KinabaluTokyo

BKI Kota Kinabalu - NRT Tokyo Narita

BKINRT

Kota Kinabalu

Thu 5/11

01:30-19:05

1 stop16h 35m

Tokyo Narita

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 889

Kota KinabaluTokyo

BKI Kota Kinabalu - HND Tokyo Haneda

BKIHND

Kota Kinabalu

Fri 13/11

01:30-00:45

1 stop22h 15m

Tokyo Haneda

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 914

Kota KinabaluTokyo

BKI Kota Kinabalu - HND Tokyo Haneda

BKIHND

Kota Kinabalu

Sat 27/2

01:30-22:45

1 stop20h 15m

Tokyo Haneda

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 926

Kota KinabaluTokyo

BKI Kota Kinabalu - NRT Tokyo Narita

BKINRT

Kota Kinabalu

Tue 12/1

01:30-20:55

1 stop18h 25m

Tokyo Narita

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 930

Kota KinabaluTokyo

BKI Kota Kinabalu - HND Tokyo Haneda

BKIHND

Kota Kinabalu

Tue 3/11

06:05-01:00

2 stops17h 55m

Tokyo Haneda

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 975

Kota KinabaluTokyo

BKI Kota Kinabalu - HND Tokyo Haneda

BKIHND

Kota Kinabalu

Thu 5/11

01:30-22:45

1 stop20h 15m

Tokyo Haneda

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 1,065

Kota KinabaluTokyo

BKI Kota Kinabalu - HND Tokyo Haneda

BKIHND

Kota Kinabalu

Sat 14/11

07:05-01:00

2 stops16h 55m

Tokyo Haneda

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 1,081

Fastest return journey

Kota KinabaluTokyo

BKI Kota Kinabalu - NRT Tokyo Narita

BKINRT

Kota Kinabalu

Sat 27/2

01:30-16:25

2 stops13h 55m

Tokyo Narita

Wed 31/12

00:00-23:00

Nonstop0h 00m

RM 1,102

Flights are sorted by cheapest return flights first.

Deals found on 16/10

Showing 1-10 of 32 resultsSorted by cheapest first

Best time to book a flight from Kota Kinabalu to Tokyo

Have a flexible travel schedule? Discover the best time to fly to Tokyo from Kota Kinabalu with our price prediction graph.

BKI-TYO

BKI-NRT

BKI-HND

Estimated return price

Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Kota Kinabalu to Tokyo

BKI-TYO

BKI-NRT

BKI-HND

What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Tokyo (average of RM 1,673). Flying from Kota Kinabalu to Tokyo in December is currently the most expensive (average of RM 2,174). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How much does it cost for a return flight from Kota Kinabalu to Tokyo?

Airfare is typical for this route at the moment.

Kota Kinabalu to Tokyo flights typically cost between RM 1,660 and RM 2,125 in November.
The cheapest return price found within the last 5 days was RM 1,693 on HK Express (7 Nov–24 Nov).

What’s the top stopover airport for flights from Kota Kinabalu to Tokyo?

Shanghai (PVG) – chosen by Cheapflights users on 32% of one-stop itineraries from Kota Kinabalu to Tokyo on Cheapflights.

What’s the cheapest stopover airport for flights from Kota Kinabalu to Tokyo?

Manila (MNL) is the most affordable one-stop option, with an average return flight price of RM 1,396.

What’s the fastest stopover option from Kota Kinabalu to Tokyo?

Flights via Incheon (ICN) have the shortest average one-way travel time for one-stop routes: 10h 28m.

Which airport typically offers the quickest stopover for flights from Kota Kinabalu to Tokyo?

Flights via Guangzhou (CAN) offer the fastest connection on this route, with an average stopover time of 2h 23m.

How far ahead should I book a flight from Kota Kinabalu to Tokyo?

The price you pay for your flight from Kota Kinabalu to Tokyo may vary depending on when you book. For the best chance of a lower fare, look to book 90 days in advance of your trip. Fares are likely to increase a fortnight or so before your departure date.

Reviews of airlines servicing Tokyo

See what other customers who have flown with China Southern,China Eastern, andHK Express from Kota Kinabalu to Tokyo have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.

China Southern

7.4

Good

179 reviews

Check prices

Reviews

1 / 8

6.0

Good

Sunil,Jul 2026

CAN - LAX

Seats were not good, handles were broken not functioning as supposed to. Need improvement on entertainment screen, most of the time froze. Food quality was poor.Not enough international languages movies. Overall need lots of improvement.

China Southern

7.4

Good

179 reviews

China Southern

7.4

Good

179 reviews

Check prices

Reviews

1 / 8

6.0

Good

Sunil,Jul 2026

CAN - LAX

China Eastern

7.3

Good

245 reviews

China Southern

7.4

Good

179 reviews

Check prices

Reviews

1 / 8

6.0

Good

Sunil,Jul 2026

CAN - LAX

HK Express

7.2

Good

47 reviews

China Southern

7.4

Good

179 reviews

Check prices

Reviews

1 / 8

6.0

Good

Sunil,Jul 2026

CAN - LAX

XiamenAir

6.7

Okay

51 reviews

China Southern

7.4

Good

179 reviews

Check prices

Reviews

1 / 8

6.0

Good

Sunil,Jul 2026

CAN - LAX

Scoot

6.7

Okay

337 reviews

China Southern

7.4

Good

179 reviews

Check prices

Reviews

1 / 8

6.0

Good

Sunil,Jul 2026

CAN - LAX

Related info for your journey

What airport do you fly from for flights from Kota Kinabalu to Tokyo?
Kota Kinabalu (BKI), located 5.8 km from the city centre, is the airport you fly out of when you book flights from Kota Kinabalu to Tokyo. 4 airlines have flights from Kota Kinabalu to Tokyo on a regular basis. Booking flights from Kota Kinabalu to Tokyo should not be difficult; the airport handles an average of 0 outbound flights to Tokyo per day.
How long is the flight from Kota Kinabalu to Tokyo?
Departing from Kota Kinabalu to Tokyo will take you 13h. Airlines will cover a distance of 4142 km. Both multi-stop and direct flights can be found to your destination and back.
What are the cheapest airlines flying from Kota Kinabalu to Tokyo round-trip?
Our cheapest airline available from Kota Kinabalu to Tokyo is HK Express. Our recent data shows that you can find tickets from as low as RM 1,338 on this airline. Additional options worth looking into are China Eastern and Scoot, starting at RM 1,469 and RM 1,651 round-trip. Users have found that HK Express is 28% cheaper than the other options available to this destination.
Can I find deals for flights from Kota Kinabalu to Tokyo that include hotel bookings?
Yes. In addition to deals on Kota Kinabalu to Tokyo flights, Cheapflights offers holiday packages that include both flights and hotel.
How can I find direct flights from Kota Kinabalu to Tokyo?
After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Kota Kinabalu to Tokyo.
Can I find deals for business class flights from Kota Kinabalu to Tokyo?
Yes. Cheapflights offers flight deals from Kota Kinabalu to Tokyo by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.
What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?
Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Tokyo (average of RM 1,673). Flying from Kota Kinabalu to Tokyo in December is currently the most expensive (average of RM 2,174). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Urayasu

Chiba

Yamanashi

Fujiyoshida

Numazu

Atami

Hakone

Kamakura

Saitama

Kawasaki

Browse thousands of different options on Cheapflights for your next trip

Airlines

Alternative routes

Complete your trip

Direct flights to Japan

Flights by cabin class

Other flight options

Other flights from Kota Kinabalu

Popular flights

Tokyo flight routes

Fly from Kota Kinabalu to Tokyo on these airlines

Scoot flights from Kota Kinabalu to Tokyo

Top 4 airlines flying from Kota Kinabalu to Tokyo

Airline	Cheapest	Average	Flexibility	On-time
HK Express	CheapestRM 1,338	AverageRM 1,632	FlexibilityNo cancel fee	On-time90%	Search HK Express flights
China Eastern	CheapestRM 1,469	AverageRM 2,012	FlexibilityNo cancel fee	On-time62%	Search China Eastern flights
Scoot	CheapestRM 1,651	AverageRM 1,884	FlexibilityNo cancel fee	On-timeN/A	Search Scoot flights
China Southern	CheapestRM 2,145	AverageRM 2,794	FlexibilityNo cancel fee	On-time69%	Search China Southern flights

Fly with Cheapflights

How does Cheapflights help users find flights from Kota Kinabalu to Tokyo?

Cheapflights makes it easy to find Kota Kinabalu to Tokyo flights by helping our users search from 900+ travel sites for deals. We also provide you with filters for cabin, price, airline, airports, number of stops, and many more to narrow down that perfect flight.

Why should you use Cheapflights to find cheap flight tickets from Kota Kinabalu to Tokyo?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from Kota Kinabalu to Tokyo for you. Better yet — we are completely free to use.

Can Cheapflights find flights from Kota Kinabalu to Tokyo with no change fees?

Yes! Cheapflights helps users easily find flights from Kota Kinabalu to Tokyo with no change fees.

Can Cheapflights notify me if prices for flights from Kota Kinabalu to Tokyo become cheaper?

Yes! Start tracking prices for Kota Kinabalu to Tokyo flights today and get alerted whenever prices for these flights change. To access this feature, click the bell icon next to the flight deals above, which will prompt you for a valid email address to receive your alerts.

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Cheap flights from Kota Kinabalu to Tokyo from RM 779

This is the cheapest retur flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 15/11. Fares are subject to change and may not be available on all flights or dates of travel.

Cheap flight deals from Kota Kinabalu to Tokyo

Cheapest flights from Kota Kinabalu to TokyoExplore the most affordable flight options available from Kota Kinabalu to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 20 October 2026.

Explore the most affordable flight options available from Kota Kinabalu to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 20 October 2026.

Best flights from Kota Kinabalu to TokyoDiscover carefully curated flight deals from Kota Kinabalu to Tokyo that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 20 October 2026.

Discover carefully curated flight deals from Kota Kinabalu to Tokyo that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 20 October 2026.

Last-minute flights from Kota Kinabalu to TokyoDiscover last-minute flight deals from Kota Kinabalu to Tokyo. Data last updated 20 October 2026 and is based on user searches.

Discover last-minute flight deals from Kota Kinabalu to Tokyo. Data last updated 20 October 2026 and is based on user searches.

One-way flights from Kota Kinabalu to TokyoSearch for one-way flight options from Kota Kinabalu to Tokyo. Find affordable one-way fares based on user searches. Data last updated 20 October 2026.

Search for one-way flight options from Kota Kinabalu to Tokyo. Find affordable one-way fares based on user searches. Data last updated 20 October 2026.

Find flight deals from Kota Kinabalu to Tokyo

Round-trip from

One-way from

Popular in

Cheapest in

Average price

Cheapflights Fare Finder

Use the filters below to find and compare flights from Kota Kinabalu to Tokyo that are best for you.

Best time to book a flight from Kota Kinabalu to Tokyo

Have a flexible travel schedule? Discover the best time to fly to Tokyo from Kota Kinabalu with our price prediction graph.

Cheapflights Insights

What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

How much does it cost for a return flight from Kota Kinabalu to Tokyo?

Airfare is typical for this route at the moment.

Kota Kinabalu to Tokyo flights typically cost between RM 1,660 and RM 2,125 in November.The cheapest return price found within the last 5 days was RM 1,693 on HK Express (7 Nov–24 Nov).

What’s the top stopover airport for flights from Kota Kinabalu to Tokyo?

Share of one-stop return flights from Kota Kinabalu to Tokyo chosen by Cheapflights users in the past 12 months, using the same stopover each way.

Shanghai (PVG) – chosen by Cheapflights users on 32% of one-stop itineraries from Kota Kinabalu to Tokyo on Cheapflights.

What’s the cheapest stopover airport for flights from Kota Kinabalu to Tokyo?

Average return fare for one-stop flights from Kota Kinabalu to Tokyo, chosen by Cheapflights users in the past 12 months, with the same stopover each way.

Manila (MNL) is the most affordable one-stop option, with an average return flight price of RM 1,396.

What’s the fastest stopover option from Kota Kinabalu to Tokyo?

Shortest average travel time for one-stop one-way flights from Kota Kinabalu to Tokyo, based on itineraries clicked by Cheapflights users over the past 12 months, grouped by stopover airport.

Flights via Incheon (ICN) have the shortest average one-way travel time for one-stop routes: 10h 28m.

Which airport typically offers the quickest stopover for flights from Kota Kinabalu to Tokyo?

Average stopover duration for one-stop one-way flights from Kota Kinabalu to Tokyo, chosen by Cheapflights users in the last 12 months, grouped by stopover airport.

Flights via Guangzhou (CAN) offer the fastest connection on this route, with an average stopover time of 2h 23m.

How far ahead should I book a flight from Kota Kinabalu to Tokyo?

The price you pay for your flight from Kota Kinabalu to Tokyo may vary depending on when you book. For the best chance of a lower fare, look to book 90 days in advance of your trip. Fares are likely to increase a fortnight or so before your departure date.

Reviews of airlines servicing Tokyo

Get insights into the airlines that provide service to Tokyo. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Tokyo. Reviews last updated 20 October 2026.

See what other customers who have flown with China Southern,China Eastern, andHK Express from Kota Kinabalu to Tokyo have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.

Related info for your journey

What airport do you fly from for flights from Kota Kinabalu to Tokyo?

How long is the flight from Kota Kinabalu to Tokyo?

What are the cheapest airlines flying from Kota Kinabalu to Tokyo round-trip?

Can I find deals for flights from Kota Kinabalu to Tokyo that include hotel bookings?

How can I find direct flights from Kota Kinabalu to Tokyo?

Can I find deals for business class flights from Kota Kinabalu to Tokyo?

What is the cheapest month to book a flight from Kota Kinabalu to Tokyo?

Travelling to a place near Tokyo?

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Fly from Kota Kinabalu to Tokyo on these airlines

Choose from the following airlines for your flight from Kota Kinabalu to Tokyo. Flights are based on user searches made on Cheapflights and were last updated on 20 October 2026.

Alternative routes for Kota Kinabalu to Tokyo

See prices for flight routes from nearby airports that may be better suited for you.

Complete your trip

Complete your trip to Tokyo by adding a car rental and/or hotel reservation to your travel itinerary.

Direct flights to Japan

Book a non-stop flight to one of these other cities located in Japan.

Search flights from Kota Kinabalu to Tokyo by cabin class

Find flights from Kota Kinabalu to Tokyo, based on your preferred cabin class, be it economy, premium economy, business, or first class.

Kota Kinabalu and Tokyo flights

Browse other Kota Kinabalu and Tokyo flight options. Last updated on 20 October 2026.

Other flights from Kota Kinabalu

Browse through other flights departing from Kota Kinabalu. Flights are based on user searches made on Cheapflights and were last updated on 20 October 2026.

Popular flight searches

Check out other popular destinations found by fellow travellers in 2026

Other flights to Tokyo

Explore flights to Tokyo departing from other origins. Flights are based on user searches made on Cheapflights and were last updated on 20 October 2026.

Top 4 airlines flying from Kota Kinabalu to Tokyo

Fly with Cheapflights

How does Cheapflights help users find flights from Kota Kinabalu to Tokyo?

Why should you use Cheapflights to find cheap flight tickets from Kota Kinabalu to Tokyo?

Can Cheapflights find flights from Kota Kinabalu to Tokyo with no change fees?

Can Cheapflights notify me if prices for flights from Kota Kinabalu to Tokyo become cheaper?

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Cheapest flights from Kota Kinabalu to Tokyo
Explore the most affordable flight options available from Kota Kinabalu to Tokyo. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 20 October 2026.

Best flights from Kota Kinabalu to Tokyo
Discover carefully curated flight deals from Kota Kinabalu to Tokyo that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 20 October 2026.

Last-minute flights from Kota Kinabalu to Tokyo
Discover last-minute flight deals from Kota Kinabalu to Tokyo. Data last updated 20 October 2026 and is based on user searches.

One-way flights from Kota Kinabalu to Tokyo
Search for one-way flight options from Kota Kinabalu to Tokyo. Find affordable one-way fares based on user searches. Data last updated 20 October 2026.

Kota Kinabalu to Tokyo flights typically cost between RM 1,660 and RM 2,125 in November.
The cheapest return price found within the last 5 days was RM 1,693 on HK Express (7 Nov–24 Nov).