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Cheap flights from Kota Kinabalu to Japan from RM 595

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 16/4. Fares are subject to change and may not be available on all flights or dates of travel.
BKI — FUK
5 Apr — 12 Apr1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Kota Kinabalu to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Kota Kinabalu to Japan
Explore the most affordable flight options available from Kota Kinabalu to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 6 March 2026.

Fri 31/701:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Thu 13/819:15
NRT
-
BKI
1 stop31h 05m
Multiple Airlines
Deal found 6/3RM 1,087
Fri 31/701:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Fri 14/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,099
Fri 31/701:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Mon 10/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,119
Fri 31/701:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Sun 9/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,182
Sun 2/801:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Fri 14/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,245
Mon 3/801:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Fri 14/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,249
Sun 2/801:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Wed 12/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,260
Sun 2/801:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Mon 10/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,264
Mon 3/801:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Wed 12/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,268
Sat 18/401:15
BKI
-
KIX
1 stop15h 15m
Multiple Airlines
Wed 22/408:15
KIX
-
BKI
1 stop17h 15m
Multiple Airlines
Deal found 5/3RM 1,288
Fri 17/401:15
BKI
-
KIX
1 stop15h 15m
Multiple Airlines
Sat 25/408:15
KIX
-
BKI
1 stop17h 15m
Multiple Airlines
Deal found 3/3RM 1,304
Mon 3/801:45
BKI
-
NRT
1 stop15h 15m
Multiple Airlines
Sun 9/813:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 6/3RM 1,331

Find flight deals from Kota Kinabalu to Japan

Keep the following information in mind while searching for Kota Kinabalu to Japan flight deals. Data was last updated 6 March 2026.

Round-trip from

RM 1,087

One-way from

RM 595

Popular in

December

Cheapest in

June

Average price

RM 1,753

Good round-trip deal

RM 2,011 or less

Good one-way deal

RM 1,493 or less
31/7-13/8
  • 31/7-13/8
  • 2 total stops
  • 46h 20m total
  • Kota Kinabalu to Japan
Search Deals
16/4
  • 16/4
  • 2 total stops
  • 33h 50m total
  • Kota Kinabalu to Japan
Search Deals
Highest demand for flights based on searches. 7% potential increase in price (RM 505 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (RM 101 potential savings vs. average return price).
Search Deals
Average for round-trip flights in March 2026
Search Deals
Price to beat on a round-trip flight from Kota Kinabalu to Japan.
Search Deals
Price to beat on a one-way flight from Kota Kinabalu to Japan.
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Kota Kinabalu to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 6 March 2026.
Use the filters below to find and compare flights from Kota Kinabalu to Japan that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight

Kota KinabaluOsaka

BKI - KIX

BKIKIX

Kota Kinabalu

Wed 29/4

09:20-19:40

1 stop9h 20m

Osaka Kansai Intl

Tue 5/5

11:05-07:25

2 stops21h 20m

RM 1,469

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Thu 16/4

01:15-19:45

1 stop17h 30m

Tokyo Narita

Fri 24/4

08:00-00:30

1 stop17h 30m

RM 1,536

Kota KinabaluOsaka

BKI - KIX

BKIKIX

Kota Kinabalu

Thu 16/4

09:20-20:35

1 stop10h 15m

Osaka Kansai Intl

Thu 23/4

11:05-19:45

3 stops33h 40m

RM 1,591

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Sat 18/4

11:45-01:00

1 stop12h 15m

Tokyo Haneda

Sat 25/4

05:55-22:25

1 stop17h 30m

RM 1,658
Fastest return journey

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Sun 19/4

09:20-22:55

1 stop12h 35m

Tokyo Haneda

Sun 26/4

06:35-15:55

1 stop10h 20m

RM 1,658

Kota KinabaluSapporo

BKI - CTS

BKICTS

Kota Kinabalu

Wed 15/4

01:15-12:30

2 stops34h 15m

Sapporo Chitose

Thu 23/4

12:55-23:30

1 stop11h 35m

RM 1,694

Kota KinabaluSapporo

BKI - CTS

BKICTS

Kota Kinabalu

Wed 29/4

00:30-19:40

2 stops18h 10m

Sapporo Chitose

Sat 9/5

11:25-10:30

2 stops24h 05m

RM 1,721

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Fri 17/4

09:05-22:35

3 stops36h 30m

Tokyo Haneda

Thu 23/4

02:20-15:55

1 stop14h 35m

RM 1,733

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Sun 19/4

14:45-07:55

2 stops16h 10m

Tokyo Narita

Sun 26/4

08:00-15:55

1 stop8h 55m

RM 1,769

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Wed 8/4

00:30-17:30

1 stop16h 00m

Tokyo Narita

Mon 13/4

21:15-11:15

2 stops15h 00m

RM 1,808

Flights are sorted by cheapest return flights first.

Deals found on 6/3

Showing 1-10 of 53 resultsSorted by cheapest first
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Best time to book a flight from Kota Kinabalu to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Kota Kinabalu with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Kota Kinabalu to Japan

What is the cheapest month to book a flight from Kota Kinabalu to Japan?

Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Japan (average of RM 756). Flying from Kota Kinabalu to Japan in April is currently the most expensive (average of RM 1,347). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How often are flights from Kota Kinabalu to Japan delayed?

About 8% of weekly flights between Kota Kinabalu and Japan have experienced delays in the past year, with the average delay time being 39 minutes.

What is the most punctual flight time for Kota Kinabalu to Japan flights?

Historically, flights departing at night are less likely to be delayed, whereas flights leaving in the early afternoon tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Monday tends to have the lowest number of delays on this route, whereas Thursday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Kota Kinabalu to Japan flights?

Over the past year, Malaysia Airlines have had the lowest number of delays on this route, with just 9% of flights being delayed.

Reviews of airlines servicing Japan

Get insights into the airlines that provide service to Japan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Japan. Reviews last updated 6 March 2026.
See what other customers who have flown with HK Express, China Eastern, andPhilippines AirAsia from Kota Kinabalu to Japan have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
HK Express
7.3
Good
44 reviews
Check prices

Food

5.9

Crew

7.5

Overall

7.3

Entertainment

5.4

Comfort

6.6

Boarding

7.4
HK Express
7.3
Good
44 reviews
HK Express
7.3
Good
44 reviews
Check prices

Food

5.9

Crew

7.5

Overall

7.3

Entertainment

5.4

Comfort

6.6

Boarding

7.4
China Eastern
7.2
Good
198 reviews
HK Express
7.3
Good
44 reviews
Check prices

Food

5.9

Crew

7.5

Overall

7.3

Entertainment

5.4

Comfort

6.6

Boarding

7.4
Philippines AirAsia
6.8
Okay
125 reviews
HK Express
7.3
Good
44 reviews
Check prices

Food

5.9

Crew

7.5

Overall

7.3

Entertainment

5.4

Comfort

6.6

Boarding

7.4
AirAsia
6.8
Okay
229 reviews
HK Express
7.3
Good
44 reviews
Check prices

Food

5.9

Crew

7.5

Overall

7.3

Entertainment

5.4

Comfort

6.6

Boarding

7.4
Scoot
6.7
Okay
319 reviews
HK Express
7.3
Good
44 reviews
Check prices

Food

5.9

Crew

7.5

Overall

7.3

Entertainment

5.4

Comfort

6.6

Boarding

7.4

Related info for your journey

Find useful and relevant information for your journey from Kota Kinabalu to Japan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Kota Kinabalu to Japan?

    Most people fly from Kota Kinabalu (BKI) if they book a flight from Kota Kinabalu to Japan. Kota Kinabalu is conveniently located just 5.8 km from Kota Kinabalu’s city centre.

  • How popular is this Kota Kinabalu to Japan flight route?

    This flight path from Kota Kinabalu to Japan was viewed by 79 users in the past month. Keep an eye out for changes in search interest prior to high and low season.

  • How long is the flight from Kota Kinabalu to Japan?

    There are many flights that can get you from Kota Kinabalu to Japan in 16h 30m. Fly via HK Express, China Eastern, or Jin Air to get the fastest option. The distance from Kota Kinabalu to Japan is about 3730 km. This flight may include one or multiple stops.

  • What are the cheapest airlines to fly from Kota Kinabalu to Japan one-way?

    To fly one-way, consider booking your trip with Philippines AirAsia, which is currently one of the cheapest options available, starting at RM 461. Scoot flights start at RM 484 while deals on AirAsia start at RM 528 one-way.

  • What are the most popular routes from Kota Kinabalu to Japan?

    The most popular flight routes from Kota Kinabalu to Japan are Kota Kinabalu - Sapporo Chitose, Kota Kinabalu - Tokyo Narita and Kota Kinabalu - Osaka Kansai Intl.

  • What are the cheapest flights from Kota Kinabalu to Japan?

    On average you can expect to pay RM 2,015 for a flight from Kota Kinabalu to Japan. The cheapest flight overall is RM 2,011 while the most popular route, (Kota Kinabalu - Sapporo Chitose) is currently priced at RM 1,686.

  • Can I find deals for flights from Kota Kinabalu to Japan that include hotel bookings?

    Yes. In addition to deals on Kota Kinabalu to Japan flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Kota Kinabalu to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Kota Kinabalu to Japan.

  • Can I find deals for business class flights from Kota Kinabalu to Japan?

    Yes. Cheapflights offers flight deals from Kota Kinabalu to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Kota Kinabalu to Japan?

    Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Japan (average of RM 756). Flying from Kota Kinabalu to Japan in April is currently the most expensive (average of RM 1,347). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Top 10 airlines flying from Kota Kinabalu to Japan

Discover the top 10 airlines that operate flights from Kota Kinabalu to Japan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 6 March 2026.
AirlineCheapestAverageFlexibilityOn-time
Jin AirCheapestRM 780AverageRM 1,978FlexibilityNo cancel feeOn-time78%
Search Jin Air flights
China EasternCheapestRM 794AverageRM 1,652FlexibilityNo cancel feeOn-time62%
Search China Eastern flights
Philippines AirAsiaCheapestRM 1,000AverageRM 1,148FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
HK ExpressCheapestRM 1,032AverageRM 1,470FlexibilityNo cancel feeOn-time90%
Search HK Express flights
ScootCheapestRM 1,162AverageRM 1,702FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
AirAsiaCheapestRM 1,403AverageRM 1,944FlexibilityNo cancel feeOn-time66%
Search AirAsia flights
T'way AirCheapestRM 1,407AverageRM 1,734FlexibilityNo cancel feeOn-time88%
Search T'way Air flights
Batik AirCheapestRM 1,514AverageRM 1,792FlexibilityNo cancel feeOn-timeN/A
Search Batik Air flights
Malaysia AirlinesCheapestRM 1,619AverageRM 2,118FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
China SouthernCheapestRM 1,900AverageRM 2,478FlexibilityNo cancel feeOn-time69%
Search China Southern flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Kota Kinabalu to Japan?

Cheapflights goes through 900+ travel sites to look for the best flight deals for flights from Kota Kinabalu to Japan. Too many options? Cheapflights also provides filters for things like airlines, price ranges, and number of stops to help you make a decision easily.

Why should you use Cheapflights to find cheap flight tickets from Kota Kinabalu to Japan?

Millions of users choose and trust Cheapflights to book the best flight deals from Kota Kinabalu to Japan for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Kota Kinabalu to Japan with no change fees?

Cheapflights does show flights with no change fees to all users. To see these options for flights from Kota Kinabalu to Japan, users can toggle the no change fees filter when performing a flight search.

Can Cheapflights notify me if prices for flights from Kota Kinabalu to Japan become cheaper?

Yes, Cheapflights has a feature called Price Alert, which notifies users when flight prices change. Track prices for your flight to Japan from Kota Kinabalu today and book when prices fit your budget.

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