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Cheap flights from Kota Kinabalu to Japan from RM 522

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 26/4. Fares are subject to change and may not be available on all flights or dates of travel.
BKI — FUK
20 Mar — 27 Mar1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Kota Kinabalu to Japan

Enter your travel dates to find the best prices.

Cheapest flights from Kota Kinabalu to Japan
Explore the most affordable flight options available from Kota Kinabalu to Japan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 18 February 2026.

Tue 7/418:15
BKI
-
HND
1 stop27h 20m
Multiple Airlines
Sun 12/423:50
HND
-
BKI
1 stop19h 45m
Multiple Airlines
Deal found 18/2RM 1,051
Sat 14/1123:25
BKI
-
HND
1 stop22h 15m
Multiple Airlines
Thu 19/1123:55
HND
-
BKI
1 stop24h 05m
Multiple Airlines
Deal found 18/2RM 1,149
Wed 11/301:30
BKI
-
KIX
1 stop16h 50m
Multiple Airlines
Tue 17/310:55
KIX
-
BKI
2 stops34h 00m
Multiple Airlines
Deal found 18/2RM 1,316
Mon 13/706:00
BKI
-
HND
1 stop15h 35m
Multiple Airlines
Fri 17/715:40
HND
-
BKI
1 stop9h 50m
Multiple Airlines
Deal found 16/2RM 1,449
Sun 12/701:15
BKI
-
NRT
1 stop12h 30m
Multiple Airlines
Fri 17/713:45
NRT
-
BKI
1 stop12h 35m
Multiple Airlines
Deal found 16/2RM 1,468
Thu 5/301:30
BKI
-
KIX
1 stop17h 40m
Multiple Airlines
Fri 13/315:25
KIX
-
BKI
1 stop28h 35m
Multiple Airlines
Deal found 18/2RM 1,480
Tue 24/207:05
BKI
-
KIX
1 stop25h 55m
Multiple Airlines
Tue 3/320:15
KIX
-
BKI
1 stop29h 15m
Multiple Airlines
Deal found 17/2RM 1,698
Tue 3/1109:20
BKI
-
NRT
1 stop8h 45m
Multiple Airlines
Tue 10/1108:50
NRT
-
BKI
1 stop11h 10m
Multiple Airlines
Deal found 18/2RM 1,714
Tue 3/322:40
BKI
-
HND
2 stops24h 40m
Multiple Airlines
Thu 5/301:45
HND
-
BKI
2 stops16h 50m
Multiple Airlines
Deal found 17/2RM 1,717
Mon 16/301:30
BKI
-
NRT
1 stop17h 30m
Multiple Airlines
Tue 24/313:50
NRT
-
BKI
1 stop11h 40m
Multiple Airlines
Deal found 15/2RM 1,725
Mon 25/501:15
BKI
-
KIX
1 stop13h 50m
HK Express
Tue 2/614:25
KIX
-
BKI
1 stop11h 05m
HK Express
Deal found 17/2RM 1,756
Mon 16/301:30
BKI
-
HND
1 stop22h 15m
HK Express
Tue 24/306:35
HND
-
BKI
1 stop18h 55m
HK Express
Deal found 15/2RM 1,772

Find flight deals from Kota Kinabalu to Japan

Keep the following information in mind while searching for Kota Kinabalu to Japan flight deals. Data was last updated 18 February 2026.

Round-trip from

RM 1,051

One-way from

RM 522

Popular in

December

Cheapest in

June

Average price

RM 1,760

Good round-trip deal

RM 1,988 or less

Good one-way deal

RM 1,476 or less
7/4-12/4
  • 7/4-12/4
  • 2 total stops
  • 47h 05m total
  • Kota Kinabalu to Japan
Search Deals
26/4
  • 26/4
  • 1 total stop
  • 11h 25m total
  • Kota Kinabalu to Japan
Search Deals
Highest demand for flights based on searches. 8% potential increase in price (RM 538 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (RM 104 potential savings vs. average return price).
Search Deals
Average for round-trip flights in February 2026
Search Deals
Price to beat on a round-trip flight from Kota Kinabalu to Japan.
Search Deals
Price to beat on a one-way flight from Kota Kinabalu to Japan.
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Kota Kinabalu to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 18 February 2026.
Use the filters below to find and compare flights from Kota Kinabalu to Japan that are best for you.

Fly from

Kota Kinabalu

Fly to

Japan

Route

Departure

Return

Price

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Tue 7/4

18:15-22:35

1 stop27h 20m

Tokyo Haneda

Sun 12/4

23:50-18:35

1 stop19h 45m

RM 1,051

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Mon 13/7

06:00-22:35

1 stop15h 35m

Tokyo Haneda

Fri 17/7

15:40-00:30

1 stop9h 50m

RM 1,449

Kota KinabaluOsaka

BKI - KIX

BKIKIX

Kota Kinabalu

Thu 5/3

01:30-20:10

1 stop17h 40m

Osaka Kansai Intl

Fri 13/3

15:25-19:00

1 stop28h 35m

RM 1,480

Kota KinabaluOsaka

BKI - KIX

BKIKIX

Kota Kinabalu

Wed 11/3

01:30-17:10

1 stop14h 40m

Osaka Kansai Intl

Tue 17/3

08:00-00:30

1 stop17h 30m

RM 1,519

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Mon 13/7

09:45-10:10

2 stops23h 25m

Tokyo Narita

Fri 17/7

11:10-01:20

1 stop15h 10m

RM 1,690

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Mon 16/3

01:30-20:00

1 stop17h 30m

Tokyo Narita

Tue 24/3

13:50-00:30

1 stop11h 40m

RM 1,725

Kota KinabaluOsaka

BKI - KIX

BKIKIX

Kota Kinabalu

Mon 25/5

01:15-16:05

1 stop13h 50m

Osaka Kansai Intl

Tue 2/6

14:25-00:30

1 stop11h 05m

RM 1,756

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Mon 16/3

01:30-00:45

1 stop22h 15m

Tokyo Haneda

Tue 24/3

06:35-00:30

1 stop18h 55m

RM 1,772

Kota KinabaluTokyo

BKI - NRT

BKINRT

Kota Kinabalu

Wed 27/5

20:30-20:00

2 stops22h 30m

Tokyo Narita

Wed 3/6

15:30-17:40

1 stop27h 10m

RM 1,791

Kota KinabaluTokyo

BKI - HND

BKIHND

Kota Kinabalu

Mon 16/3

01:30-00:45

1 stop22h 15m

Tokyo Haneda

Tue 24/3

14:30-01:20

3 stops35h 50m

RM 1,803

Flights are sorted by cheapest return flights first.

Deals found on 15/2

Showing 1-10 of 57 results
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Best time to book a flight from Kota Kinabalu to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Kota Kinabalu with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Kota Kinabalu to Japan

What is the cheapest month to book a flight from Kota Kinabalu to Japan?

Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Japan (average of RM 748). Flying from Kota Kinabalu to Japan in April is currently the most expensive (average of RM 1,332). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from BKI to JP?

Find hourly flight availability from Kota Kinabalu to Japan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated 18 February 2026.

When flying from Kota Kinabalu to Japan, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

How often are flights from Kota Kinabalu to Japan delayed?

About 8% of weekly flights between Kota Kinabalu and Japan have experienced delays in the past year, with the average delay time being 39 minutes.

What is the most punctual flight time for Kota Kinabalu to Japan flights?

Historically, flights departing at night are less likely to be delayed, whereas flights leaving in the early afternoon tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Monday tends to have the lowest number of delays on this route, whereas Thursday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Kota Kinabalu to Japan flights?

Over the past year, Malaysia Airlines have had the lowest number of delays on this route, with just 10% of flights being delayed.

Reviews of airlines servicing Japan

Get insights into the airlines that provide service to Japan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Japan. Reviews last updated 18 February 2026.
See what other customers who have flown with China Eastern, HK Express, andAirAsia from Kota Kinabalu to Japan have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
China Eastern
7.2
Good
193 reviews
Check prices

Boarding

7.6

Food

6.8

Crew

7.8

Entertainment

6.1

Comfort

7.2

Overall

7.2

Reviews

1 / 6
4.0
Okay

Joe,Feb 2026

NRT - PVG

All of my flights with China Eastern were delayed by a minimum of an hour each. The worst part about it is that neither the WiFi on board and nor the WiFi at Shanghai airport were working so I couldn't notify anyone either to or from Tokyo
China Eastern
7.2
Good
193 reviews
China Eastern
7.2
Good
193 reviews
Check prices

Boarding

7.6

Food

6.8

Crew

7.8

Entertainment

6.1

Comfort

7.2

Overall

7.2

Reviews

1 / 6
4.0
Okay

Joe,Feb 2026

NRT - PVG

All of my flights with China Eastern were delayed by a minimum of an hour each. The worst part about it is that neither the WiFi on board and nor the WiFi at Shanghai airport were working so I couldn't notify anyone either to or from Tokyo
HK Express
7.2
Good
43 reviews
China Eastern
7.2
Good
193 reviews
Check prices

Boarding

7.6

Food

6.8

Crew

7.8

Entertainment

6.1

Comfort

7.2

Overall

7.2

Reviews

1 / 6
4.0
Okay

Joe,Feb 2026

NRT - PVG

All of my flights with China Eastern were delayed by a minimum of an hour each. The worst part about it is that neither the WiFi on board and nor the WiFi at Shanghai airport were working so I couldn't notify anyone either to or from Tokyo
AirAsia
6.8
Okay
229 reviews
China Eastern
7.2
Good
193 reviews
Check prices

Boarding

7.6

Food

6.8

Crew

7.8

Entertainment

6.1

Comfort

7.2

Overall

7.2

Reviews

1 / 6
4.0
Okay

Joe,Feb 2026

NRT - PVG

All of my flights with China Eastern were delayed by a minimum of an hour each. The worst part about it is that neither the WiFi on board and nor the WiFi at Shanghai airport were working so I couldn't notify anyone either to or from Tokyo
Philippines AirAsia
6.7
Okay
122 reviews
China Eastern
7.2
Good
193 reviews
Check prices

Boarding

7.6

Food

6.8

Crew

7.8

Entertainment

6.1

Comfort

7.2

Overall

7.2

Reviews

1 / 6
4.0
Okay

Joe,Feb 2026

NRT - PVG

All of my flights with China Eastern were delayed by a minimum of an hour each. The worst part about it is that neither the WiFi on board and nor the WiFi at Shanghai airport were working so I couldn't notify anyone either to or from Tokyo
Scoot
6.7
Okay
319 reviews
China Eastern
7.2
Good
193 reviews
Check prices

Boarding

7.6

Food

6.8

Crew

7.8

Entertainment

6.1

Comfort

7.2

Overall

7.2

Reviews

1 / 6
4.0
Okay

Joe,Feb 2026

NRT - PVG

All of my flights with China Eastern were delayed by a minimum of an hour each. The worst part about it is that neither the WiFi on board and nor the WiFi at Shanghai airport were working so I couldn't notify anyone either to or from Tokyo

Related info for your journey

Find useful and relevant information for your journey from Kota Kinabalu to Japan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Kota Kinabalu to Japan?

    Most people fly from Kota Kinabalu (BKI) if they book a flight from Kota Kinabalu to Japan. Kota Kinabalu is conveniently located just 5.8 km from Kota Kinabalu’s city centre.

  • How popular is this Kota Kinabalu to Japan flight route?

    This flight path from Kota Kinabalu to Japan was viewed by 72 users in the past month. Keep an eye out for changes in search interest prior to high and low season.

  • How long is the flight from Kota Kinabalu to Japan?

    There are many flights that can get you from Kota Kinabalu to Japan in 13h 50m. Fly via HK Express or JAL to get the fastest option. The distance from Kota Kinabalu to Japan is about 3730 km. This flight may include one or multiple stops.

  • What are the cheapest airlines to fly from Kota Kinabalu to Japan one-way?

    To fly one-way, consider booking your trip with Philippines AirAsia, which is currently one of the cheapest options available, starting at RM 456. Scoot flights start at RM 479 while deals on AirAsia start at RM 522 one-way.

  • What are the most popular routes from Kota Kinabalu to Japan?

    The most popular flight routes from Kota Kinabalu to Japan are Kota Kinabalu - Tokyo Narita, Kota Kinabalu - Tokyo Haneda and Kota Kinabalu - Osaka Kansai Intl.

  • What are the cheapest flights from Kota Kinabalu to Japan?

    On average you can expect to pay RM 1,988 for a flight from Kota Kinabalu to Japan. The cheapest flight overall is RM 1,763 while the most popular route, (Kota Kinabalu - Tokyo Narita) is currently priced at RM 1,686.

  • Can I find deals for flights from Kota Kinabalu to Japan that include hotel bookings?

    Yes. In addition to deals on Kota Kinabalu to Japan flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Kota Kinabalu to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Kota Kinabalu to Japan.

  • Can I find deals for business class flights from Kota Kinabalu to Japan?

    Yes. Cheapflights offers flight deals from Kota Kinabalu to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Kota Kinabalu to Japan?

    Currently, September is the cheapest month in which you can book a flight from Kota Kinabalu to Japan (average of RM 748). Flying from Kota Kinabalu to Japan in April is currently the most expensive (average of RM 1,332). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Top 10 airlines flying from Kota Kinabalu to Japan

Discover the top 10 airlines that operate flights from Kota Kinabalu to Japan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 18 February 2026.
AirlineCheapestAverageFlexibilityOn-time
Jin AirCheapestRM 771AverageRM 1,826FlexibilityNo cancel feeOn-time78%
Search Jin Air flights
China EasternCheapestRM 785AverageRM 1,633FlexibilityNo cancel feeOn-time62%
Search China Eastern flights
Philippines AirAsiaCheapestRM 989AverageRM 1,135FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
HK ExpressCheapestRM 1,020AverageRM 1,432FlexibilityNo cancel feeOn-time90%
Search HK Express flights
ScootCheapestRM 1,149AverageRM 1,682FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
T'way AirCheapestRM 1,346AverageRM 1,715FlexibilityNo cancel feeOn-time88%
Search T'way Air flights
Batik AirCheapestRM 1,350AverageRM 1,760FlexibilityNo cancel feeOn-timeN/A
Search Batik Air flights
AirAsiaCheapestRM 1,364AverageRM 1,853FlexibilityNo cancel feeOn-time66%
Search AirAsia flights
Malaysia AirlinesCheapestRM 1,601AverageRM 2,111FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights
China SouthernCheapestRM 1,879AverageRM 2,449FlexibilityNo cancel feeOn-time69%
Search China Southern flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Kota Kinabalu to Japan?

Cheapflights goes through 900+ travel sites to look for the best flight deals for flights from Kota Kinabalu to Japan. Too many options? Cheapflights also provides filters for things like airlines, price ranges, and number of stops to help you make a decision easily.

Why should you use Cheapflights to find cheap flight tickets from Kota Kinabalu to Japan?

Millions of users choose and trust Cheapflights to book the best flight deals from Kota Kinabalu to Japan for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Kota Kinabalu to Japan with no change fees?

Cheapflights does show flights with no change fees to all users. To see these options for flights from Kota Kinabalu to Japan, users can toggle the no change fees filter when performing a flight search.

Can Cheapflights notify me if prices for flights from Kota Kinabalu to Japan become cheaper?

Yes, Cheapflights has a feature called Price Alert, which notifies users when flight prices change. Track prices for your flight to Japan from Kota Kinabalu today and book when prices fit your budget.

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