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Cheap flights from Tokyo to Kota Kinabalu from RM 634

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 28/1. Fares are subject to change and may not be available on all flights or dates of travel.
TYO — BKI
9 1월 — 16 1월1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Tokyo to Kota Kinabalu

Enter your travel dates to find the best prices.

Cheapest flights from Tokyo to Kota Kinabalu
Explore the most affordable flight options available from Tokyo to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 10 12월 2025.

일 28/1214:35NRT - BKI
1 stop28h 25mChina Southern
목 1/119:05BKI - NRT
1 stop17h 15mChina Southern
Deal found 8/12RM 2,357
일 28/1220:30NRT - BKI
1 stop15h 45mMultiple Airlines
수 31/1201:30BKI - NRT
1 stop15h 35mMultiple Airlines
Deal found 8/12RM 2,370
월 29/1213:50NRT - BKI
1 stop11h 40mChina Eastern
수 31/1201:30BKI - NRT
1 stop10h 20mChina Eastern
Deal found 8/12RM 2,452
월 29/1210:45HND - BKI
1 stop14h 45mChina Southern
수 31/1201:45BKI - HND
1 stop10h 50mChina Southern
Deal found 8/12RM 2,728
월 29/1210:45HND - BKI
1 stop14h 45mChina Southern
목 1/101:45BKI - HND
1 stop10h 50mChina Southern
Deal found 8/12RM 2,933
일 28/1214:55NRT - BKI
2 stops34h 35mChina Eastern
수 31/1201:30BKI - NRT
1 stop10h 20mChina Eastern
Deal found 8/12RM 2,970
월 29/1217:10HND - BKI
2 stops32h 20mMultiple Airlines
목 1/109:20BKI - HND
2 stops26h 10mMultiple Airlines
Deal found 8/12RM 2,979
월 29/1213:50NRT - BKI
1 stop11h 40mMultiple Airlines
목 1/101:30BKI - NRT
1 stop16h 35mMultiple Airlines
Deal found 8/12RM 3,049
일 28/1217:10HND - BKI
1 stop15h 50mMultiple Airlines
수 31/1201:30BKI - HND
1 stop20h 15mMultiple Airlines
Deal found 9/12RM 3,053
월 29/1215:05HND - BKI
2 stops34h 50mMultiple Airlines
목 1/101:45BKI - HND
1 stop10h 50mMultiple Airlines
Deal found 8/12RM 3,402

Find flight deals from Tokyo to Kota Kinabalu

Discover tips and strategies to find the most affordable flight options for your journey from Tokyo (TYO) to Kota Kinabalu (BKI). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 10 12월 2025.

Round-trip from

RM 1,267

One-way from

RM 634
HK Express
  • HK Express
  • 22/1-28/1
  • 2 total stops
  • 47h 40m total
  • Tokyo to Kota Kinabalu
Search Deals
HK Express
  • HK Express
  • 28/1
  • 1 total stop
  • 10h 05m total
  • Tokyo to Kota Kinabalu
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Tokyo to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 10 12월 2025.
Use the filters below to find and compare flights from Tokyo to Kota Kinabalu that are best for you.

Fly from

Tokyo

Fly to

Kota Kinabalu

Route

Departure

Return

Price

TokyoKota Kinabalu

NRT - BKI

NRTBKI

Tokyo Narita

목 22/1

11:25-18:30

1 stop32h 05m

Kota Kinabalu

수 28/1

01:30-18:05

1 stop15h 35m

RM 1,267

TokyoKota Kinabalu

HND - BKI

HNDBKI

Tokyo Haneda

목 22/1

23:55-00:30

1 stop25h 35m

Kota Kinabalu

수 28/1

01:30-00:45

1 stop22h 15m

RM 1,271

TokyoKota Kinabalu

NRT - BKI

NRTBKI

Tokyo Narita

목 22/1

19:00-00:30

1 stop30h 30m

Kota Kinabalu

수 28/1

01:30-19:05

1 stop16h 35m

RM 1,304

TokyoKota Kinabalu

NRT - BKI

NRTBKI

Tokyo Narita

금 23/1

08:55-18:30

1 stop10h 35m

Kota Kinabalu

금 30/1

18:55-10:25

1 stop14h 30m

RM 1,362

TokyoKota Kinabalu

HND - BKI

HNDBKI

Tokyo Haneda

목 22/1

14:30-19:55

2 stops30h 25m

Kota Kinabalu

수 28/1

01:30-22:45

1 stop20h 15m

RM 1,514

TokyoKota Kinabalu

HND - BKI

HNDBKI

Tokyo Haneda

토 7/3

15:05-18:00

1 stop27h 55m

Kota Kinabalu

월 9/3

19:05-20:00

1 stop23h 55m

RM 1,901

TokyoKota Kinabalu

HND - BKI

HNDBKI

Tokyo Haneda

토 7/3

10:10-00:30

1 stop15h 20m

Kota Kinabalu

일 8/3

01:30-21:15

1 stop18h 45m

RM 2,049

TokyoKota Kinabalu

NRT - BKI

NRTBKI

Tokyo Narita

목 22/1

18:55-23:05

1 stop29h 10m

Kota Kinabalu

수 28/1

00:05-17:55

1 stop16h 50m

RM 2,148

TokyoKota Kinabalu

NRT - BKI

NRTBKI

Tokyo Narita

토 7/3

14:20-00:30

1 stop11h 10m

Kota Kinabalu

일 8/3

01:30-20:20

1 stop17h 50m

RM 2,193

TokyoKota Kinabalu

NRT - BKI

NRTBKI

Tokyo Narita

목 22/1

19:55-19:00

2 stops24h 05m

Kota Kinabalu

목 29/1

11:50-10:40

2 stops21h 50m

RM 2,197

Flights are sorted by cheapest return flights first.

Deals found on 8/12

Showing 1-10 of 32 results
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Best time to book a flight from Tokyo to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Tokyo with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Tokyo to Kota Kinabalu

How often are flights from Tokyo to Kota Kinabalu delayed?

About 0% of weekly flights between Tokyo and Kota Kinabalu have experienced delays in the past year, with the average delay time being 0 minutes.

What is the most punctual flight time for Tokyo to Kota Kinabalu flights?

Historically, flights departing at night are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Tuesday tends to have the lowest number of delays on this route, whereas Friday has historically faced a higher average of delays compared to other days of the week.

Related info for your journey

Find useful and relevant information for your journey from Tokyo to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly into for flights to Kota Kinabalu from Tokyo?

    If you book a flight to Kota Kinabalu from Tokyo, you will be flying to Kota Kinabalu, which is the city’s only airport. Kota Kinabalu (BKI) is located 5.8 km from the centre of Kota Kinabalu. There are 0 flights from Tokyo to Kota Kinabalu per day from 0 different airlines.

  • How long is the flight from Tokyo to Kota Kinabalu?

    Airlines like HK Express and China Southern fly from Tokyo to Kota Kinabalu in about 25h 35m. The time it takes to get you to your destination can typically vary by up to 2h 20m. Tokyo and Kota Kinabalu are separated by a distance of 4088 km. Both multi-stop and direct flights can be found to your destination and back.

  • What are the cheapest airlines to fly from Tokyo to Kota Kinabalu one-way?

    To fly one-way, consider booking your trip with Scoot, which is currently one of the cheapest options available, starting at RM 601. Philippines AirAsia flights start at RM 612 while deals on Jin Air start at RM 809 one-way.

  • Can I find deals for flights from Tokyo to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Tokyo to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Tokyo to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Tokyo to Kota Kinabalu.

  • Can I find deals for business class flights from Tokyo to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Tokyo to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Alternative routes for Tokyo to Kota Kinabalu

See prices for flight routes from nearby airports that may be better suited for you.
Narita to Kota Kinabalu flights

Fly with Cheapflights

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How does Cheapflights help users find flights from Tokyo to Kota Kinabalu?

Cheapflights helps you search for flights from Tokyo to Kota Kinabalu via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from Tokyo to Kota Kinabalu?

Millions of users choose and trust Cheapflights to book the best flight deals from Tokyo to Kota Kinabalu for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Tokyo to Kota Kinabalu with no change fees?

Cheapflights does show flights with no change fees to all users. To see these options for flights from Tokyo to Kota Kinabalu, users can toggle the no change fees filter when performing a flight search.

Can Cheapflights notify me if prices for flights from Tokyo to Kota Kinabalu become cheaper?

Not ready to book yet? You can track prices for flights from Tokyo to Kota Kinabalu on Cheapflights with our Price Alert feature and get notified when better prices are available.

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