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Cheap flights from Cebu City to Kota Kinabalu from RM 321

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 25/11. Fares are subject to change and may not be available on all flights or dates of travel.
CEB — BKI
4 Sep — 11 Sep1
1 adult

Cheap flight deals from Cebu City to Kota Kinabalu

Discover tips and strategies to find the most affordable flight options for your journey from Cebu City (CEB) to Kota Kinabalu (BKI). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 30 August 2025.

Round-trip from

RM 591

One-way from

RM 321

Popular in

March

Cheapest in

October

Average price

RM 844
Philippines AirAsia
  • Philippines AirAsia
  • 11/10-18/10
  • 2 total stops
  • 38h 15m total
  • Cebu City to Kota Kinabalu
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Philippines AirAsia
  • Philippines AirAsia
  • 25/11
  • 1 total stop
  • 19h 15m total
  • Cebu City to Kota Kinabalu
Search Deals
Highest demand for flights based on searches. 22% potential increase in price (RM 1,108 potential increase over avg. return price).
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Cheapest flight prices on average. 10% potential price decrease (RM 360 potential savings vs. average return price).
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Average for round-trip flights in August 2025
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Find flight deals from Cebu City to Kota Kinabalu

Cheapest flights from Cebu City to Kota Kinabalu
Explore the most affordable flight options available from Cebu City to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 30 August 2025.

Sat 11/1001:50CEB - BKI
1 stop23h 30mPhilippines AirAsia
Sat 18/1001:45BKI - CEB
1 stop14h 45mPhilippines AirAsia
Deal found 28/8RM 591
Wed 26/1111:15CEB - BKI
1 stop7h 15mMultiple Airlines
Fri 28/1118:55BKI - CEB
1 stop6h 50mMultiple Airlines
Deal found 28/8RM 696
Wed 26/1108:05CEB - BKI
1 stop10h 25mMultiple Airlines
Sun 30/1118:55BKI - CEB
1 stop5h 25mMultiple Airlines
Deal found 28/8RM 705
Thu 27/1123:15CEB - BKI
1 stop19h 15mPhilippines AirAsia
Sun 30/1118:55BKI - CEB
1 stop27h 05mPhilippines AirAsia
Deal found 28/8RM 726
Mon 13/1023:55CEB - BKI
1 stop25h 25mMultiple Airlines
Sun 19/1001:45BKI - CEB
1 stop5h 35mMultiple Airlines
Deal found 29/8RM 734
Wed 26/1108:05CEB - BKI
1 stop10h 25mMultiple Airlines
Mon 1/1218:55BKI - CEB
1 stop9h 35mMultiple Airlines
Deal found 28/8RM 760
Fri 28/1105:30CEB - BKI
1 stop13h 00mMultiple Airlines
Sun 30/1118:55BKI - CEB
1 stop8h 10mMultiple Airlines
Deal found 28/8RM 772
Thu 25/919:25CEB - BKI
1 stop5h 55mMultiple Airlines
Mon 29/901:45BKI - CEB
1 stop19h 25mMultiple Airlines
Deal found 29/8RM 793
Fri 28/1108:05CEB - BKI
1 stop10h 25mMultiple Airlines
Mon 1/1218:55BKI - CEB
1 stop9h 35mMultiple Airlines
Deal found 28/8RM 827
Sat 11/1001:50CEB - BKI
2 stops15h 20mMultiple Airlines
Sat 18/1001:45BKI - CEB
1 stop5h 35mMultiple Airlines
Deal found 28/8RM 865

Cheapflights Fare Finder

 
Customise your flight search to find flights from Cebu City to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 30 August 2025.
Use the filters below to find and compare flights from Cebu City to Kota Kinabalu that are best for you.

Fly from

Cebu City

Fly to

Kota Kinabalu

Route

Departure

Return

Price

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sat 11/10

01:50-01:20

1 stop23h 30m

Kota Kinabalu

Sat 18/10

01:45-16:30

1 stop14h 45m

RM 591

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 26/11

11:15-18:30

1 stop7h 15m

Kota Kinabalu

Fri 28/11

18:55-01:45

1 stop6h 50m

RM 696

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 26/11

08:05-18:30

1 stop10h 25m

Kota Kinabalu

Sun 30/11

18:55-00:20

1 stop5h 25m

RM 705

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 27/11

23:15-18:30

1 stop19h 15m

Kota Kinabalu

Sun 30/11

18:55-22:00

1 stop27h 05m

RM 726

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Mon 13/10

23:55-01:20

1 stop25h 25m

Kota Kinabalu

Sun 19/10

01:45-07:20

1 stop5h 35m

RM 734

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 26/11

08:05-18:30

1 stop10h 25m

Kota Kinabalu

Mon 1/12

18:55-04:30

1 stop9h 35m

RM 760

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Fri 28/11

05:30-18:30

1 stop13h 00m

Kota Kinabalu

Sun 30/11

18:55-03:05

1 stop8h 10m

RM 772

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 25/9

19:25-01:20

1 stop5h 55m

Kota Kinabalu

Mon 29/9

01:45-21:10

1 stop19h 25m

RM 793

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 27/11

03:35-18:30

1 stop14h 55m

Kota Kinabalu

Mon 1/12

18:55-04:30

1 stop9h 35m

RM 793

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 12/10

10:00-01:20

2 stops15h 20m

Kota Kinabalu

Sat 18/10

01:45-16:30

1 stop14h 45m

RM 793

Flights are sorted by cheapest return flights first.

Deals found on 28/8

Showing 1-10 of 21 results
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Best time to book a flight from Cebu City to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu City with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Related info for your journey

Find useful and relevant information for your journey from Cebu City to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How long is the flight from Cebu City to Kota Kinabalu?

    Philippines AirAsia can get you from Cebu City to Kota Kinabalu in just under 23h 30m. Your travel time can differ by up to . The distance from Cebu City to Kota Kinabalu is about 999 km.

  • Can I find deals for flights from Cebu City to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Cebu City to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Cebu City to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu City to Kota Kinabalu.

  • Can I find deals for business class flights from Cebu City to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Cebu City to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Cebu City to Kota Kinabalu?

    Currently, July is the cheapest month in which you can book a flight from Cebu City to Kota Kinabalu (average of RM 71). Flying from Cebu City to Kota Kinabalu in December is currently the most expensive (average of RM 100). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Complete your trip

Complete your trip to Kota Kinabalu by adding a car rental and/or hotel reservation to your travel itinerary.
Kota Kinabalu car hire
Kota Kinabalu Airport car hire
Labuan Airport car hire
Sandakan car hire
Tawau car hire

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Can Cheapflights find flights from Cebu City to Kota Kinabalu with no change fees?

Users can book flights with no change fees policies with our dedicated filters. Book flights from Cebu City to Kota Kinabalu flexibly with Cheapflights today.

Can Cheapflights notify me if prices for flights from Cebu City to Kota Kinabalu become cheaper?

Yes, Cheapflights offers price alerts on Cebu City to Kota Kinabalu flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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