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Cheap flights from Cebu City to Kota Kinabalu from RM 364

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 15/1. Fares are subject to change and may not be available on all flights or dates of travel.
CEB — BKI
17 Jan — 24 Jan1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Cebu City to Kota Kinabalu

Enter your travel dates to find the best prices.

Best flights from Cebu City to Kota Kinabalu
Discover carefully curated flight deals from Cebu City to Kota Kinabalu that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 18 December 2025.

Tue 9/607:50CEB - BKI
1 stop17h 30mPhilippines AirAsia
Mon 15/601:45BKI - CEB
1 stop14h 45mPhilippines AirAsia
Deal found 17/12RM 674
Fri 30/108:00CEB - BKI
1 stop10h 30mMultiple Airlines
Tue 3/206:00BKI - CEB
2 stops15h 25mMultiple Airlines
Deal found 18/12RM 674
Thu 29/112:55CEB - BKI
1 stop10h 05mMultiple Airlines
Tue 3/206:00BKI - CEB
2 stops15h 25mMultiple Airlines
Deal found 18/12RM 723
Sat 6/603:25CEB - BKI
1 stop21h 55mMultiple Airlines
Sat 13/610:10BKI - CEB
1 stop11h 15mMultiple Airlines
Deal found 17/12RM 752
Mon 2/212:30CEB - BKI
1 stop12h 00mCathay Pacific
Thu 5/201:30BKI - CEB
1 stop9h 50mCathay Pacific
Deal found 16/12RM 1,741
Sun 1/202:35CEB - BKI
1 stop8h 30mSingapore Airlines
Fri 6/220:00BKI - CEB
1 stop18h 50mSingapore Airlines
Deal found 17/12RM 1,761
Thu 29/100:25CEB - BKI
2 stops14h 55mPhilippine Airlines
Tue 3/207:20BKI - CEB
2 stops15h 40mPhilippine Airlines
Deal found 18/12RM 1,786
Tue 9/607:50CEB - BKI
2 stops13h 45mMultiple Airlines
Tue 16/605:20BKI - CEB
2 stops16h 05mMultiple Airlines
Deal found 17/12RM 1,483

Find flight deals from Cebu City to Kota Kinabalu

Discover tips and strategies to find the most affordable flight options for your journey from Cebu City (CEB) to Kota Kinabalu (BKI). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 18 December 2025.

Round-trip from

RM 674

One-way from

RM 364

Popular in

March

Cheapest in

February

Average price

RM 911
30/1-3/2
  • 30/1-3/2
  • 3 total stops
  • 25h 55m total
  • Cebu City to Kota Kinabalu
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 15/1
  • 1 total stop
  • 18h 45m total
  • Cebu City to Kota Kinabalu
Search Deals
Highest demand for flights based on searches. 16% potential increase in price (RM 738 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 9% potential price decrease (RM 325 potential savings vs. average return price).
Search Deals
Average for round-trip flights in December 2025
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Cebu City to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 18 December 2025.
Use the filters below to find and compare flights from Cebu City to Kota Kinabalu that are best for you.

Fly from

Cebu City

Fly to

Kota Kinabalu

Route

Departure

Return

Price

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Tue 9/6

07:50-01:20

1 stop17h 30m

Kota Kinabalu

Mon 15/6

01:45-16:30

1 stop14h 45m

RM 674

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Fri 30/1

08:00-18:30

1 stop10h 30m

Kota Kinabalu

Tue 3/2

06:00-21:25

2 stops15h 25m

RM 674

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 29/1

12:55-23:00

1 stop10h 05m

Kota Kinabalu

Tue 3/2

06:00-21:25

2 stops15h 25m

RM 723

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sat 6/6

03:25-01:20

1 stop21h 55m

Kota Kinabalu

Sat 13/6

10:10-21:25

1 stop11h 15m

RM 752

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Tue 9/6

07:50-21:35

2 stops13h 45m

Kota Kinabalu

Tue 16/6

05:20-21:25

2 stops16h 05m

RM 1,483

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Mon 2/2

12:30-00:30

1 stop12h 00m

Kota Kinabalu

Thu 5/2

01:30-11:20

1 stop9h 50m

RM 1,741

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 1/2

02:35-11:05

1 stop8h 30m

Kota Kinabalu

Fri 6/2

20:00-14:50

1 stop18h 50m

RM 1,761

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 29/1

00:25-15:20

2 stops14h 55m

Kota Kinabalu

Tue 3/2

07:20-23:00

2 stops15h 40m

RM 1,786

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 21/1

08:00-18:30

1 stop10h 30m

RM 364

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 15/1

23:45-18:30

1 stop18h 45m

RM 364

Flights are sorted by cheapest return flights first.

Deals found on 16/12

Showing 1-10 of 13 results
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Best time to book a flight from Cebu City to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu City with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Related info for your journey

Find useful and relevant information for your journey from Cebu City to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How long is the flight from Cebu City to Kota Kinabalu?

    Philippines AirAsia can get you from Cebu City to Kota Kinabalu in just under 17h 30m. Your travel time can differ by up to . The distance from Cebu City to Kota Kinabalu is about 999 km.

  • Can I find deals for flights from Cebu City to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Cebu City to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Cebu City to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu City to Kota Kinabalu.

  • Can I find deals for business class flights from Cebu City to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Cebu City to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Complete your trip

Complete your trip to Kota Kinabalu by adding a car rental and/or hotel reservation to your travel itinerary.
Kota Kinabalu car hire
Kota Kinabalu Airport car hire
Labuan Airport car hire
Sandakan car hire

Fly with Cheapflights

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How does Cheapflights help users find flights from Cebu City to Kota Kinabalu?

900+ travel sites are searched through when a user searches for a flight using Cheapflights. From the search interface, users can use filters to choose airlines, airports, flight times, cabin classes and more to their preference. Book your flight to Kota Kinabalu from Cebu City today with Cheapflights!

Why should you use Cheapflights to find cheap flight tickets from Cebu City to Kota Kinabalu?

Millions of users choose and trust Cheapflights to book the best flight deals from Cebu City to Kota Kinabalu for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Cebu City to Kota Kinabalu with no change fees?

Users can book flights with no change fees policies with our dedicated filters. Book flights from Cebu City to Kota Kinabalu flexibly with Cheapflights today.

Can Cheapflights notify me if prices for flights from Cebu City to Kota Kinabalu become cheaper?

Yes, Cheapflights offers price alerts on Cebu City to Kota Kinabalu flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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