How long is the flight from Cebu City to Kota Kinabalu?

Philippines AirAsia can get you from Cebu City to Kota Kinabalu in just under 11h 55m. Your travel time can differ by up to . The distance from Cebu City to Kota Kinabalu is about 999 km.

In terms of precipitation, rainfall in Kota Kinabalu ranges from 60.0 - 351.0 inches per month. October is typically the wettest month, when rainfall can reach 351.0 mm. February is typically the driest time to visit Kota Kinabalu when rainfall is around 60.0 mm.

If weather is an important factor for your trip to Kota Kinabalu, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travellers hoping to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 26.0 C).

What is the cheapest time of day to fly from CEB to BKI?

When flying from Cebu City to Kota Kinabalu, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Can I find deals for flights from Cebu City to Kota Kinabalu that include hotel bookings?

Yes. In addition to deals on Cebu City to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

How can I find direct flights from Cebu City to Kota Kinabalu?

After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu City to Kota Kinabalu.

Can I find deals for business class flights from Cebu City to Kota Kinabalu?

Yes. Cheapflights offers flight deals from Cebu City to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

RM 435+ Cheap Flights from Cebu City to Kota Kinabalu

Cheap flight deals from Cebu City to Kota Kinabalu

Enter your travel dates to find the best prices.

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Cheapest flights from Cebu City to Kota Kinabalu
Explore the most affordable flight options available from Cebu City to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 12 September 2026.

Mon 19/1017:00 -

1 stop8h 20m

Mon 26/1019:05 -

1 stop14h 55m

Deal found 10/9RM 895

Mon 26/1010:35 -

1 stop7h 45m

Mon 2/1119:05 -

1 stop10h 50m

Deal found 11/9RM 932

Sun 18/1002:00 -

1 stop17h 30m

Fri 23/1020:45 -

1 stop15h 10m

Deal found 10/9RM 948

Fri 23/1017:00 -

1 stop8h 20m

Fri 30/1019:05 -

1 stop10h 50m

Deal found 8/9RM 952

Tue 15/900:05 -

1 stop25h 15m

Sun 20/901:45 -

1 stop19h 25m

Deal found 8/9RM 985

Tue 22/900:40 -

1 stop24h 40m

Mon 5/1001:45 -

1 stop5h 35m

Deal found 11/9RM 1,001

Mon 26/1014:45 -

2 stops20h 25m

Mon 2/1119:05 -

1 stop5h 45m

Deal found 11/9RM 1,139

Fri 23/1010:20 -

2 stops15h 00m

Fri 30/1019:05 -

1 stop5h 25m

Deal found 8/9RM 1,229

Mon 21/1206:25 -

1 stop11h 55m

Fri 25/1219:05 -

1 stop10h 50m

Deal found 9/9RM 1,237

Mon 19/1006:25 -

1 stop18h 55m

Fri 23/1020:45 -

2 stops26h 30m

Deal found 10/9RM 1,273

Find flight deals from Cebu City to Kota Kinabalu

Round-trip from	RM 895
One-way from	RM 435

Philippines AirAsia
19/10-26/10
2 total stops
23h 15m total
Cebu City to Kota Kinabalu

Search Deals

Scoot
16/11-31/12
1 total stop
28h 00m total
Cebu City to Kota Kinabalu

Search Deals

Cheapflights Fare Finder

Use the filters below to find and compare flights from Cebu City to Kota Kinabalu that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Wed 7/10

05:10-01:20

1 stop20h 10m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 456

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Mon 5/10

05:10-01:20

1 stop20h 10m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 460

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Tue 26/1

20:05-18:20

1 stop22h 15m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 488

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Sun 17/1

06:25-18:20

1 stop11h 55m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 500

Fastest return journey

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Mon 5/10

02:00-11:15

1 stop9h 15m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 509

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Wed 7/10

10:20-01:20

2 stops15h 00m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 590

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Tue 26/1

14:45-08:50

2 stops18h 05m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 631

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Tue 17/11

06:45-08:50

2 stops26h 05m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 740

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Tue 6/10

12:55-07:25

2 stops18h 30m

Kota Kinabalu

Wed 31/12

00:00-00:00

Nonstop0h 00m

RM 777

Cebu CityKota Kinabalu

CEB Cebu City Mactan Intl - BKI Kota Kinabalu

CEBBKI

Cebu City Mactan Intl

Fri 23/10

10:20-01:20

2 stops15h 00m

Kota Kinabalu

Fri 30/10

19:05-00:30

1 stop5h 25m

RM 1,229

Flights are sorted by cheapest return flights first.

Deals found on 7/9

Showing 1-10 of 17 resultsSorted by cheapest first

Best time to book a flight from Cebu City to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu City with our price prediction graph.

CEB-BKI

Estimated return price

Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Related info for your journey

How long is the flight from Cebu City to Kota Kinabalu?
Philippines AirAsia can get you from Cebu City to Kota Kinabalu in just under 11h 55m. Your travel time can differ by up to . The distance from Cebu City to Kota Kinabalu is about 999 km.
Can I find deals for flights from Cebu City to Kota Kinabalu that include hotel bookings?
Yes. In addition to deals on Cebu City to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.
How can I find direct flights from Cebu City to Kota Kinabalu?
After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu City to Kota Kinabalu.
Can I find deals for business class flights from Cebu City to Kota Kinabalu?
Yes. Cheapflights offers flight deals from Cebu City to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

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How does Cheapflights help users find flights from Cebu City to Kota Kinabalu?

900+ travel sites are searched through when a user searches for a flight using Cheapflights. From the search interface, users can use filters to choose airlines, airports, flight times, cabin classes and more to their preference. Book your flight to Kota Kinabalu from Cebu City today with Cheapflights!

Why should you use Cheapflights to find cheap flight tickets from Cebu City to Kota Kinabalu?

Millions of users choose and trust Cheapflights to book the best flight deals from Cebu City to Kota Kinabalu for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Cebu City to Kota Kinabalu with no change fees?

Users can book flights with no change fees policies with our dedicated filters. Book flights from Cebu City to Kota Kinabalu flexibly with Cheapflights today.

Can Cheapflights notify me if prices for flights from Cebu City to Kota Kinabalu become cheaper?

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Cheap flights from Cebu City to Kota Kinabalu from RM 435

This is the cheapest retur flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 16/11. Fares are subject to change and may not be available on all flights or dates of travel.

Cheap flight deals from Cebu City to Kota Kinabalu

Cheapest flights from Cebu City to Kota KinabaluExplore the most affordable flight options available from Cebu City to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 12 September 2026.

Explore the most affordable flight options available from Cebu City to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 12 September 2026.

Best flights from Cebu City to Kota KinabaluDiscover carefully curated flight deals from Cebu City to Kota Kinabalu that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 12 September 2026.

Discover carefully curated flight deals from Cebu City to Kota Kinabalu that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 12 September 2026.

Last-minute flights from Cebu City to Kota KinabaluDiscover last-minute flight deals from Cebu City to Kota Kinabalu. Data last updated 12 September 2026 and is based on user searches.

Discover last-minute flight deals from Cebu City to Kota Kinabalu. Data last updated 12 September 2026 and is based on user searches.

One-way flights from Cebu City to Kota KinabaluSearch for one-way flight options from Cebu City to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated 12 September 2026.

Search for one-way flight options from Cebu City to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated 12 September 2026.

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Best time to book a flight from Cebu City to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu City with our price prediction graph.

Related info for your journey

How long is the flight from Cebu City to Kota Kinabalu?

Can I find deals for flights from Cebu City to Kota Kinabalu that include hotel bookings?

How can I find direct flights from Cebu City to Kota Kinabalu?

Can I find deals for business class flights from Cebu City to Kota Kinabalu?

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Complete your trip

Complete your trip to Kota Kinabalu by adding a car rental and/or hotel reservation to your travel itinerary.

Direct flights to Sabah

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Search flights from Cebu City to Kota Kinabalu by cabin class

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Other flights to Kota Kinabalu

Explore flights to Kota Kinabalu departing from other origins. Flights are based on user searches made on Cheapflights and were last updated on 12 September 2026.

Cebu City and Kota Kinabalu flights

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Why should you use Cheapflights to find cheap flight tickets from Cebu City to Kota Kinabalu?

Can Cheapflights find flights from Cebu City to Kota Kinabalu with no change fees?

Can Cheapflights notify me if prices for flights from Cebu City to Kota Kinabalu become cheaper?

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Cheapest flights from Cebu City to Kota Kinabalu
Explore the most affordable flight options available from Cebu City to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 12 September 2026.

Best flights from Cebu City to Kota Kinabalu
Discover carefully curated flight deals from Cebu City to Kota Kinabalu that have cost, travel time, and stopovers in mind to ensure you get the best travel experience. Data last updated 12 September 2026.

Last-minute flights from Cebu City to Kota Kinabalu
Discover last-minute flight deals from Cebu City to Kota Kinabalu. Data last updated 12 September 2026 and is based on user searches.

One-way flights from Cebu City to Kota Kinabalu
Search for one-way flight options from Cebu City to Kota Kinabalu. Find affordable one-way fares based on user searches. Data last updated 12 September 2026.