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Cheap flights from Cebu City to Kota Kinabalu from RM 415

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 3/9. Fares are subject to change and may not be available on all flights or dates of travel.
CEB — BKI
13 Aug — 20 Aug1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Cebu City to Kota Kinabalu

Enter your travel dates to find the best prices.

Cheapest flights from Cebu City to Kota Kinabalu
Explore the most affordable flight options available from Cebu City to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 14 July 2026.

Sun 30/814:15
CEB
-
BKI
1 stop11h 05m
Philippines AirAsia
Sun 6/901:45
BKI
-
CEB
1 stop10h 40m
Philippines AirAsia
Deal found 11/7RM 835
Sat 29/803:50
CEB
-
BKI
1 stop21h 30m
Multiple Airlines
Sun 6/901:45
BKI
-
CEB
2 stops16h 40m
Multiple Airlines
Deal found 11/7RM 985
Fri 31/718:15
CEB
-
BKI
1 stop7h 05m
Philippines AirAsia
Wed 5/801:45
BKI
-
CEB
1 stop5h 35m
Philippines AirAsia
Deal found 10/7RM 989
Fri 24/718:15
CEB
-
BKI
1 stop7h 05m
Philippines AirAsia
Sun 26/701:45
BKI
-
CEB
1 stop5h 35m
Philippines AirAsia
Deal found 9/7RM 1,022
Thu 20/822:35
CEB
-
BKI
1 stop26h 45m
Multiple Airlines
Mon 24/801:45
BKI
-
CEB
1 stop12h 15m
Multiple Airlines
Deal found 10/7RM 1,079
Mon 14/1208:00
CEB
-
BKI
1 stop10h 30m
Philippines AirAsia
Sun 3/118:55
BKI
-
CEB
1 stop12h 35m
Philippines AirAsia
Deal found 9/7RM 1,164
Fri 31/710:05
CEB
-
BKI
2 stops15h 15m
Multiple Airlines
Wed 5/801:45
BKI
-
CEB
1 stop5h 35m
Multiple Airlines
Deal found 10/7RM 1,217
Fri 24/718:15
CEB
-
BKI
1 stop7h 05m
Multiple Airlines
Sun 26/701:45
BKI
-
CEB
2 stops33h 00m
Multiple Airlines
Deal found 9/7RM 1,238
Wed 2/914:15
CEB
-
BKI
1 stop11h 05m
Multiple Airlines
Sun 6/906:00
BKI
-
CEB
1 stop15h 55m
Multiple Airlines
Deal found 11/7RM 1,262
Mon 21/918:15
CEB
-
BKI
1 stop7h 05m
Multiple Airlines
Wed 23/918:15
BKI
-
CEB
1 stop19h 35m
Multiple Airlines
Deal found 10/7RM 1,315

Find flight deals from Cebu City to Kota Kinabalu

Discover tips and strategies to find the most affordable flight options for your journey from Cebu City (CEB) to Kota Kinabalu (BKI). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 14 July 2026.

Round-trip from

RM 835

One-way from

RM 415
Philippines AirAsia
  • Philippines AirAsia
  • 30/8-6/9
  • 2 total stops
  • 21h 45m total
  • Cebu City to Kota Kinabalu
Search Deals
3/9
  • 3/9
  • 1 total stop
  • 26h 45m total
  • Cebu City to Kota Kinabalu
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Cebu City to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 14 July 2026.
Use the filters below to find and compare flights from Cebu City to Kota Kinabalu that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 30/8

14:15-01:20

1 stop11h 05m

Kota Kinabalu

Sun 6/9

01:45-12:25

1 stop10h 40m

RM 835

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sat 29/8

03:50-01:20

1 stop21h 30m

Kota Kinabalu

Sun 6/9

01:45-18:25

2 stops16h 40m

RM 985
Fastest return journey

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Fri 31/7

18:15-01:20

1 stop7h 05m

Kota Kinabalu

Wed 5/8

01:45-07:20

1 stop5h 35m

RM 989

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 20/8

22:35-01:20

1 stop26h 45m

Kota Kinabalu

Mon 24/8

01:45-14:00

1 stop12h 15m

RM 1,079

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 2/9

14:15-01:20

1 stop11h 05m

Kota Kinabalu

Sun 6/9

06:00-21:55

1 stop15h 55m

RM 1,262

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Fri 24/7

08:50-01:20

2 stops16h 30m

Kota Kinabalu

Sun 26/7

01:45-10:45

2 stops33h 00m

RM 1,555

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 6/8

14:50-08:30

2 stops17h 40m

Kota Kinabalu

Sun 9/8

11:00-21:55

1 stop10h 55m

RM 1,771

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Mon 21/9

14:35-18:20

2 stops27h 45m

Kota Kinabalu

Wed 23/9

16:20-21:10

2 stops28h 50m

RM 2,076

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 5/8

00:05-18:20

2 stops18h 15m

Kota Kinabalu

Sun 9/8

17:45-21:10

2 stops27h 25m

RM 2,076

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 2/9

22:30-17:00

2 stops18h 30m

Kota Kinabalu

Sun 6/9

06:50-10:35

2 stops27h 45m

RM 2,093

Flights are sorted by cheapest return flights first.

Deals found on 10/7

Showing 1-10 of 16 resultsSorted by cheapest first
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Best time to book a flight from Cebu City to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu City with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Related info for your journey

Find useful and relevant information for your journey from Cebu City to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How long is the flight from Cebu City to Kota Kinabalu?

    Philippines AirAsia can get you from Cebu City to Kota Kinabalu in just under 11h 05m. Your travel time can differ by up to . The distance from Cebu City to Kota Kinabalu is about 999 km.

  • Can I find deals for flights from Cebu City to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Cebu City to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Cebu City to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu City to Kota Kinabalu.

  • Can I find deals for business class flights from Cebu City to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Cebu City to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Complete your trip

Complete your trip to Kota Kinabalu by adding a car rental and/or hotel reservation to your travel itinerary.
Kota Kinabalu car hire
Kota Kinabalu Airport car hire
Labuan Airport car hire
Sandakan car hire

Fly with Cheapflights

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How does Cheapflights help users find flights from Cebu City to Kota Kinabalu?

900+ travel sites are searched through when a user searches for a flight using Cheapflights. From the search interface, users can use filters to choose airlines, airports, flight times, cabin classes and more to their preference. Book your flight to Kota Kinabalu from Cebu City today with Cheapflights!

Why should you use Cheapflights to find cheap flight tickets from Cebu City to Kota Kinabalu?

Millions of users choose and trust Cheapflights to book the best flight deals from Cebu City to Kota Kinabalu for free. We help you search and compare prices from hundreds of airlines for the right flight just for you.

Can Cheapflights find flights from Cebu City to Kota Kinabalu with no change fees?

Users can book flights with no change fees policies with our dedicated filters. Book flights from Cebu City to Kota Kinabalu flexibly with Cheapflights today.

Can Cheapflights notify me if prices for flights from Cebu City to Kota Kinabalu become cheaper?

Yes, Cheapflights offers price alerts on Cebu City to Kota Kinabalu flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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