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Cheap flights from Manila to Kota Kinabalu from RM 211

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 26/6. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
18 Jun — 25 Jun1
1 adult

Cheapflights Tip: The best prices from Manila Ninoy Aquino Intl to Kota Kinabalu are usually found in June or May, booked 71 days in advance, depart on a Wednesday or Friday and return on a Tuesday

Cheap flight deals from Manila to Kota Kinabalu

Discover tips and strategies to find the most affordable flight options for your journey from Manila (MNL) to Kota Kinabalu (BKI). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 13 June 2025.

Round-trip from

RM 317

One-way from

RM 211

Popular in

January

Cheapest in

June

Average price

RM 410

Good round-trip deal

RM 369 or less

Good one-way deal

RM 156 or less
Philippines AirAsia
  • Philippines AirAsia
  • 24/7-26/7
  • Nonstop
  • 4h 20m total
  • Manila to Kota Kinabalu
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Philippines AirAsia
  • Philippines AirAsia
  • 26/6
  • Nonstop
  • 2h 10m total
  • Manila to Kota Kinabalu
Search Deals
Highest demand for flights based on searches. 13% potential increase in price (RM 331 potential increase over avg. return price).
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Cheapest flight prices on average. 1% potential price decrease (RM 37 potential savings vs. average return price).
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Average for round-trip flights in June 2025
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Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Kota Kinabalu.
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Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Kota Kinabalu.
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Find flight deals from Manila to Kota Kinabalu

Cheapest flights from Manila to Kota Kinabalu
Explore the most affordable flight options available from Manila to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 13 June 2025.

Thu 24/723:10MNL - BKI
Nonstop2h 10mPhilippines AirAsia
Sat 26/701:45BKI - MNL
Nonstop2h 10mPhilippines AirAsia
Deal found 11/6RM 317
Mon 1/923:10MNL - BKI
Nonstop2h 10mMultiple Airlines
Fri 5/922:00BKI - MNL
1 stop7h 40mMultiple Airlines
Deal found 12/6RM 587
Wed 8/1006:55MNL - BKI
1 stop12h 30mScoot
Mon 13/1020:25BKI - MNL
1 stop22h 10mScoot
Deal found 11/6RM 718
Fri 1/821:35MNL - BKI
1 stop18h 35mRoyal Brunei Airlines
Sun 3/821:20BKI - MNL
1 stop23h 25mRoyal Brunei Airlines
Deal found 11/6RM 1,047
Wed 2/717:45MNL - BKI
1 stop24h 35mChina Southern
Wed 9/719:20BKI - MNL
1 stop27h 55mChina Southern
Deal found 12/6RM 1,296
Wed 25/607:20MNL - BKI
1 stop8h 15mPhilippine Airlines
Sat 28/609:30BKI - MNL
1 stop10h 40mPhilippine Airlines
Deal found 11/6RM 1,461
Thu 26/606:50MNL - BKI
1 stop17h 50mMalaysia Airlines
Mon 30/609:30BKI - MNL
1 stop11h 55mMalaysia Airlines
Deal found 11/6RM 1,972

Cheapflights Fare Finder

Customise your flight search to find flights from Manila to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 13 June 2025.
Use the filters below to find and compare flights from Manila to Kota Kinabalu that are best for you.

Fly from

Manila

Fly to

Kota Kinabalu

Route

Departure

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Thu 24/7

23:10-01:20

Nonstop2h 10m

Kota Kinabalu

Sat 26/7

01:45-03:55

Nonstop2h 10m

RM 317

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 1/9

23:10-01:20

Nonstop2h 10m

Kota Kinabalu

Fri 5/9

22:00-05:40

1 stop7h 40m

RM 587

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 10/10

06:55-21:00

1 stop14h 05m

Kota Kinabalu

Wed 15/10

20:25-18:35

1 stop22h 10m

RM 760

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Fri 1/8

21:35-16:10

1 stop18h 35m

Kota Kinabalu

Sun 3/8

21:20-20:45

1 stop23h 25m

RM 1,047

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 2/7

17:45-18:20

1 stop24h 35m

Kota Kinabalu

Wed 9/7

19:20-23:15

1 stop27h 55m

RM 1,296

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 8/10

07:40-19:25

1 stop11h 45m

Kota Kinabalu

Mon 13/10

20:25-15:45

1 stop19h 20m

RM 1,309

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Wed 25/6

07:20-21:35

1 stop14h 15m

Kota Kinabalu

Mon 30/6

22:20-20:10

1 stop21h 50m

RM 1,389

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Thu 26/6

20:35-22:45

Nonstop2h 10m

RM 211

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Mon 21/7

06:55-18:25

1 stop11h 30m

RM 350

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

Sun 13/7

22:45-09:25

1 stop10h 40m

RM 422

Flights are sorted by cheapest return flights first.

Deals found on 10/6

Showing 1-10 of 15 results
1
2

Best time to book a flight from Manila to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Manila with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Manila to Kota Kinabalu

How far ahead should I book a flight from Manila to Kota Kinabalu?

Use this chart to determine the optimal time to book a return flight from Manila to Kota Kinabalu. Price data was last updated on 9 June 2025.

To ensure you get the cheapest price possible for a flight from Manila to Kota Kinabalu, you should look to book at least 71 days in advance of your intended travel date. The price of your flight may increase if you delay and leave booking until a week or so before departure.

What is the cheapest month to book a flight from Manila to Kota Kinabalu?

Currently, July is the cheapest month in which you can book a flight from Manila to Kota Kinabalu (average of RM 71). Flying from Manila to Kota Kinabalu in December is currently the most expensive (average of RM 100). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to BKI?

Find hourly flight availability from Manila to Kota Kinabalu. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated 13 June 2025.

When flying from Manila to Kota Kinabalu, the time of day you fly usually plays a role in the price. Save by searching for a flight at midday, which can drop the price by up to 26% versus a flight in the morning.

Weekly flight availability from Manila to Kota Kinabalu

Explore weekly flight availability from Manila to Kota Kinabalu. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated 13 June 2025.

The most flights from MNL to BKI are scheduled on a Monday (1 on average). You will have fewer flight options on Monday, which is when the least amount of flights are scheduled (1 on average).

Rainfall in Kota Kinabalu by month

Plan your trip to Kota Kinabalu by taking into account the average rainfall totals by month.

In terms of precipitation, rainfall in Kota Kinabalu ranges from 60.0 - 351.0 inches per month. October is typically the wettest month, when rainfall can reach 351.0 mm. February is typically the driest time to visit Kota Kinabalu when rainfall is around 60.0 mm.

Temperature in Kota Kinabalu by month

Plan your trip to Kota Kinabalu by taking into account the average temperature totals by month.

If weather is an important factor for your trip to Kota Kinabalu, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travellers hoping to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 26.0 C).

Reviews of airlines servicing Kota Kinabalu

Get insights into the airlines that provide service to Kota Kinabalu. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Kota Kinabalu. Reviews last updated 13 June 2025.
Read reviews from past customers who have flown Singapore Airlines, China Southern and Malaysia Airlines from Manila to Kota Kinabalu. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
Singapore Airlines
8.1
Very Good
1,302 reviews
Check prices

Food

7.7

Boarding

8.2

Crew

8.6

Entertainment

8.0

Comfort

7.9

Overall

8.1

Reviews

1 / 20
6.0
Good

Pierre,Apr 2025

MLE - SIN

3 boarding pass checkpoints at the gate. Long line before boarding. Poor leg room in economy.. Flight crew rounds practically non existent during flight.
Singapore Airlines
8.1
Very Good
1,302 reviews
Singapore Airlines
8.1
Very Good
1,302 reviews
Check prices

Food

7.7

Boarding

8.2

Crew

8.6

Entertainment

8.0

Comfort

7.9

Overall

8.1

Reviews

1 / 20
6.0
Good

Pierre,Apr 2025

MLE - SIN

3 boarding pass checkpoints at the gate. Long line before boarding. Poor leg room in economy.. Flight crew rounds practically non existent during flight.
China Southern
7.5
Good
99 reviews
Singapore Airlines
8.1
Very Good
1,302 reviews
Check prices

Food

7.7

Boarding

8.2

Crew

8.6

Entertainment

8.0

Comfort

7.9

Overall

8.1

Reviews

1 / 20
6.0
Good

Pierre,Apr 2025

MLE - SIN

3 boarding pass checkpoints at the gate. Long line before boarding. Poor leg room in economy.. Flight crew rounds practically non existent during flight.
Malaysia Airlines
7.4
Good
263 reviews
Singapore Airlines
8.1
Very Good
1,302 reviews
Check prices

Food

7.7

Boarding

8.2

Crew

8.6

Entertainment

8.0

Comfort

7.9

Overall

8.1

Reviews

1 / 20
6.0
Good

Pierre,Apr 2025

MLE - SIN

3 boarding pass checkpoints at the gate. Long line before boarding. Poor leg room in economy.. Flight crew rounds practically non existent during flight.
Philippine Airlines
7.2
Good
871 reviews
Singapore Airlines
8.1
Very Good
1,302 reviews
Check prices

Food

7.7

Boarding

8.2

Crew

8.6

Entertainment

8.0

Comfort

7.9

Overall

8.1

Reviews

1 / 20
6.0
Good

Pierre,Apr 2025

MLE - SIN

3 boarding pass checkpoints at the gate. Long line before boarding. Poor leg room in economy.. Flight crew rounds practically non existent during flight.
China Eastern
7.2
Good
150 reviews
Singapore Airlines
8.1
Very Good
1,302 reviews
Check prices

Food

7.7

Boarding

8.2

Crew

8.6

Entertainment

8.0

Comfort

7.9

Overall

8.1

Reviews

1 / 20
6.0
Good

Pierre,Apr 2025

MLE - SIN

3 boarding pass checkpoints at the gate. Long line before boarding. Poor leg room in economy.. Flight crew rounds practically non existent during flight.

Related info for your journey

Find useful and relevant information for your journey from Manila to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airports do I use to fly from Manila to Kota Kinabalu?

    If you wish to fly to Kota Kinabalu from Manila, then you need to book flights from Manila Ninoy Aquino Intl to Kota Kinabalu. There is 1 flight from Ninoy Aquino Intl (MNL) to Kota Kinabalu (BKI) per day to choose from. Flights to Kota Kinabalu from Ninoy Aquino Intl are available from 1 airline, which means you should have some options if you want to compare airfare deals. 2h 10m is how long a nonstop flight from Manila to Kota Kinabalu typically takes.

  • How popular is this Manila to Kota Kinabalu flight route?

    Flights from Manila Ninoy Aquino Intl to Kota Kinabalu have been viewed 76 times in the past calendar month.

  • What are the cheapest airlines flying from Manila to Kota Kinabalu round-trip?

    Cheapflights users have booked flights from Manila to Kota Kinabalu round-trip from RM 317. Other airlines that can offer you cheap pricing are Scoot, from RM 760, and Royal Brunei Airlines, from RM 1,047. Philippines AirAsia is currently priced 35% below the average price you’ll pay for this route.

  • What are the cheapest airlines to fly from Manila to Kota Kinabalu one-way?

    RM 211 is the cheapest one-way deal found within the past few days, from Philippines AirAsia. You may also be able to find cheap deals on Scoot and AirAsia, with prices starting from RM 350 and RM 422, respectively.

  • What are the cheapest flights from Manila to Kota Kinabalu?

    While on average a flight from Manila to Kota Kinabalu is generally RM 289, our data shows the cheapest flight currently is RM 152. When looking at the most popular route, (Manila Ninoy Aquino Intl - Kota Kinabalu), you can expect to pay RM 456 for that flight.

  • Can I find deals for flights from Manila to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Manila to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Manila to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Kota Kinabalu.

  • Can I find deals for business class flights from Manila to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Manila to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Kota Kinabalu?

    Currently, July is the cheapest month in which you can book a flight from Manila to Kota Kinabalu (average of RM 71). Flying from Manila to Kota Kinabalu in December is currently the most expensive (average of RM 100). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Fly from Manila to Kota Kinabalu on these airlines

Choose from the following airlines for your flight from Manila to Kota Kinabalu. Flights are based on user searches made on Cheapflights and were last updated on 13 June 2025.
Philippines AirAsia flights from Manila Ninoy Aquino Intl to Kota Kinabalu

Top airline flying from Manila to Kota Kinabalu

Discover the top airline that operate flights from Manila to Kota Kinabalu. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 13 June 2025.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapestRM 369AverageRM 518FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Kota Kinabalu?

Deals for Manila to Kota Kinabalu flights are sourced from 900+ travel sites when you use Cheapflights. When all flight results come back, Cheapflights lets you sort and filter flights using different criteria to choose better, like price, airport, cabin class, and plenty of other options.

Why should you use Cheapflights to find cheap flight tickets from Manila to Kota Kinabalu?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Kota Kinabalu from Manila.

Can Cheapflights find flights from Manila to Kota Kinabalu with no change fees?

Cheapflights does show flights with no change fees to all users. To see these options for flights from Manila to Kota Kinabalu, users can toggle the no change fees filter when performing a flight search.

Can Cheapflights notify me if prices for flights from Manila to Kota Kinabalu become cheaper?

Yes, Cheapflights has a feature called Price Alert, which notifies users when flight prices change. Track prices for your flight to Kota Kinabalu from Manila today and book when prices fit your budget.

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