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Cheap flights from Cebu to Kota Kinabalu from RM 512

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 12/8. Fares are subject to change and may not be available on all flights or dates of travel.
CEB — BKI
1 Jul — 8 Jul1
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from Cebu to Kota Kinabalu

Enter your travel dates to find the best prices.

Cheapest flights from Cebu to Kota Kinabalu
Explore the most affordable flight options available from Cebu to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 1 June 2026.

Mon 13/718:05
CEB
-
BKI
1 stop7h 15m
Philippines AirAsia
Sun 19/701:45
BKI
-
CEB
1 stop5h 35m
Philippines AirAsia
Deal found 29/5RM 1,186
Thu 25/623:40
CEB
-
BKI
1 stop25h 40m
Multiple Airlines
Wed 1/701:45
BKI
-
CEB
1 stop5h 35m
Multiple Airlines
Deal found 28/5RM 1,226
Tue 14/702:10
CEB
-
BKI
1 stop23h 10m
Multiple Airlines
Wed 22/718:25
BKI
-
CEB
1 stop19h 05m
Multiple Airlines
Deal found 31/5RM 1,389
Mon 13/718:05
CEB
-
BKI
1 stop7h 15m
Multiple Airlines
Sun 19/701:45
BKI
-
CEB
2 stops10h 50m
Multiple Airlines
Deal found 29/5RM 1,468
Sat 24/1002:05
CEB
-
BKI
1 stop16h 55m
Scoot
Thu 29/1011:50
BKI
-
CEB
1 stop24h 10m
Scoot
Deal found 30/5RM 1,905
Sun 11/1002:00
CEB
-
BKI
1 stop17h 30m
Scoot
Wed 14/1009:50
BKI
-
CEB
1 stop26h 05m
Scoot
Deal found 27/5RM 2,000

Find flight deals from Cebu to Kota Kinabalu

Keep the following information in mind while searching for Cebu to Kota Kinabalu flight deals. Data was last updated 1 June 2026.

Round-trip from

RM 1,186

One-way from

RM 512
Philippines AirAsia
  • Philippines AirAsia
  • 13/7-19/7
  • 2 total stops
  • 12h 50m total
  • Cebu to Kota Kinabalu
Search Deals
12/8
  • 12/8
  • 1 total stop
  • 6h 00m total
  • Cebu to Kota Kinabalu
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from Cebu to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 407,431 searches. Data last updated 1 June 2026.
Use the filters below to find and compare flights from Cebu to Kota Kinabalu that are best for you.

Fly from

Fly to

Route

Departure

Return

Price

Cheapest return flight
Fastest return journey

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Mon 13/7

18:05-01:20

1 stop7h 15m

Kota Kinabalu

Sun 19/7

01:45-07:20

1 stop5h 35m

RM 1,186

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Thu 25/6

23:40-01:20

1 stop25h 40m

Kota Kinabalu

Wed 1/7

01:45-07:20

1 stop5h 35m

RM 1,226

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 15/7

19:20-01:20

1 stop6h 00m

Kota Kinabalu

Wed 22/7

18:25-11:55

2 stops17h 30m

RM 1,536

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 11/10

02:00-19:30

1 stop17h 30m

Kota Kinabalu

Wed 14/10

09:50-11:55

1 stop26h 05m

RM 2,000

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Mon 12/10

09:20-15:35

2 stops30h 15m

Kota Kinabalu

Wed 14/10

05:20-04:55

2 stops23h 35m

RM 2,488

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 25/10

15:40-19:00

1 stop27h 20m

Kota Kinabalu

Thu 29/10

14:40-14:50

2 stops48h 10m

RM 2,670
Cheapest one-way
Fastest single journey

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Wed 12/8

19:20-01:20

1 stop6h 00m

RM 512

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Tue 10/11

21:45-18:30

1 stop20h 45m

RM 512

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Mon 9/11

10:40-18:30

2 stops7h 50m

RM 714

Cebu CityKota Kinabalu

CEB - BKI

CEBBKI

Cebu City Mactan Intl

Sun 8/11

21:40-11:05

2 stops13h 25m

RM 754

Flights are sorted by cheapest return flights first.

Deals found on 27/5

Showing 1-10 of 14 resultsSorted by cheapest first
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Best time to book a flight from Cebu to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Cebu with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Cebu to Kota Kinabalu
No data available for this route at this time. Please check back soon.

Related info for your journey

Find useful and relevant information for your journey from Cebu to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly into for flights to Kota Kinabalu from Cebu?

    Located just 5.8 km from the city centre, Kota Kinabalu (BKI) is the airport most travelers will use when flying to Kota Kinabalu from Cebu.

  • How long is the flight from Cebu to Kota Kinabalu?

    Departing from Cebu to Kota Kinabalu will take you 7h 15m. Cebu and Kota Kinabalu are separated by a distance of 999 km. This flight may include one or multiple stops.

  • Can I find deals for flights from Cebu to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Cebu to Kota Kinabalu flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from Cebu to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Cebu to Kota Kinabalu.

  • Can I find deals for business class flights from Cebu to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Cebu to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

See more FAQs

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Alternative routes for Cebu to Kota Kinabalu

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Deals for Cebu to Kota Kinabalu flights are sourced from 900+ travel sites when you use Cheapflights. When all flight results come back, Cheapflights lets you sort and filter flights using different criteria to choose better, like price, airport, cabin class, and plenty of other options.

Why should you use Cheapflights to find cheap flight tickets from Cebu to Kota Kinabalu?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Kota Kinabalu from Cebu.

Can Cheapflights find flights from Cebu to Kota Kinabalu with no change fees?

Yes! Cheapflights helps users easily find flights from Cebu to Kota Kinabalu with no change fees.

Can Cheapflights notify me if prices for flights from Cebu to Kota Kinabalu become cheaper?

Yes, Cheapflights offers price alerts on Cebu to Kota Kinabalu flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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